ggKbase home page

PLM3-1_200_b2_sep16_scaffold_672

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b2_sep16_scaffold_672_1
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(373..1530)
DNA (1158bp) protein (386aa)
hypothetical protein Tax=Desulfitobacterium hafniense RepID=UPI00036B372E
arabinose efflux permease family protein
Tax=RBG_16_Euryarchaeota_41_19_curated
PLM3-1_200_b2_sep16_scaffold_672_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1545..1889)
DNA (345bp) protein (115aa)
Uncharacterized conserved protein Tax=Kytococcus sedentarius (strain ATCC 14392 / DSM 20547 / CCM 314 / 541) RepID=C7NIJ9_KYTSD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b2_sep16_scaffold_672_3
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1925..3145
DNA (1221bp) protein (407aa)
Membrane-bound lytic murein transglycosylase A family protein Tax=delta proteobacterium NaphS2 RepID=D8F5R8_9DELT
membrane-bound lytic murein transglycosylase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b2_sep16_scaffold_672_4
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

3227..4348
DNA (1122bp) protein (374aa)
Reactivating factor for ethanolamine ammonia lyase bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM3-1_200_b2_sep16_scaffold_672_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4359..5471
DNA (1113bp) protein (371aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Rhizobium sp. CF080 genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
afuA; iron (III)-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b2_sep16_scaffold_672_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5487..6236
DNA (750bp) protein (250aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b2_sep16_scaffold_672_7
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6306..7454
DNA (1149bp) protein (383aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Rhizobium sp. CF080 genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ABC-type Fe3+ transport system periplasmic component
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b2_sep16_scaffold_672_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7481..8173
DNA (693bp) protein (231aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b2_sep16_scaffold_672_9
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8179..9180
DNA (1002bp) protein (334aa)
amidohydrolase Tax=Frankia sp. Iso899 RepID=UPI0003B69676
Uncharacterized protein {ECO:0000313|EMBL:ETW97604.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
amidohydrolase 2
PLM3-1_200_b2_sep16_scaffold_672_10
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9135..9335
DNA (201bp) protein (67aa)
SorK Tax=Sorangium cellulosum RepID=E5FND7_SORCE
Uncharacterized protein {ECO:0000313|EMBL:ETW97604.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
PLM3-1_200_b2_sep16_scaffold_672_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9348..10397
DNA (1050bp) protein (350aa)
Gentisate 1,2-dioxygenase Tax=Mycobacterium sp. (strain JLS) RepID=A3Q499_MYCSJ
cupin
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b2_sep16_scaffold_672_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10517..11512
DNA (996bp) protein (332aa)
Putative dioxigenase oxidoreductase Tax=Streptomyces zinciresistens K42 RepID=G2GEJ0_9ACTO
Cupin 2 conserved barrel domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b2_sep16_scaffold_672_13
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11531..12499
DNA (969bp) protein (323aa)
Dihydrodipicolinate synthetase Tax=Mycobacterium gilvum (strain PYR-GCK) RepID=A4T3E4_MYCGI
dihydrodipicolinate synthetase
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_200_b2_sep16_scaffold_672_14
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12665..13864
DNA (1200bp) protein (400aa)
amidohydrolase Tax=Sporichthya polymorpha RepID=UPI00036FF3CE
Uncharacterized protein {ECO:0000313|EMBL:ETW97604.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
PLM3-1_200_b2_sep16_scaffold_672_15
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13943..15106
DNA (1164bp) protein (388aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Rhizobium sp. CF080 genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b2_sep16_scaffold_672_16
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15155..16264
DNA (1110bp) protein (370aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Rhizobium sp. CF080 genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ABC-type Fe3+ transport system periplasmic component
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b2_sep16_scaffold_672_17
R_NC10_66_22, NC10, Bacteria

Not on your lists

16404..17858
DNA (1455bp) protein (485aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I1G0_CALAS
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_200_b2_sep16_scaffold_672_18
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

17974..18348
DNA (375bp) protein (125aa)
Putative uncharacterized protein Tax=uncultured bacterium RepID=B6EWU8_9BACT
hypothetical protein
Tax=RBG_16_NC10_65_8_curated
PLM3-1_200_b2_sep16_scaffold_672_19
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18539..19411
DNA (873bp) protein (291aa)
cation diffusion facilitator family transporter bin=GWD2_Deltaproteobacteria_55_8 species=Paenibacillus elgii genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
cation diffusion facilitator family transporter
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b2_sep16_scaffold_672_20
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19555..19740
DNA (186bp) protein (62aa)
ABC transporter, ATP-binding protein bin=GWD2_Deltaproteobacteria_55_8 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ybhS; ABC-type multidrug transport system, permease component YbhS
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_200_b2_sep16_scaffold_672_21
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19700..20644)
DNA (945bp) protein (315aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Chromobacterium violaceum genus=Chromobacterium taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b2_sep16_scaffold_672_22
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20641..21636)
DNA (996bp) protein (332aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein bin=GWD2_Deltaproteobacteria_55_8 species=Methylobacterium radiotolerans genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Displaying 22 items

View Taxonomy