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PLM3-1_50_b1_sep16_scaffold_1159

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_1159_1
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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984..1157
DNA (174bp) protein (58aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF85247.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_1159_2
unknown

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1384..1653
DNA (270bp) protein (90aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1159_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2264..2809
DNA (546bp) protein (182aa)
Putative poly(3-hydroxyalkanoate) synthase component Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIU2_NITGG
phaE; poly(3-hydroxyalkanoate) synthase component
Putative poly(3-hydroxyalkanoate) synthase component {ECO:0000313|EMBL:AFU58998.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1159_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2830..3888
DNA (1059bp) protein (353aa)
phaC1; poly(R)-hydroxyalkanoic acid synthase (EC:2.3.1.-)
Poly(R)-hydroxyalkanoic acid synthase {ECO:0000313|EMBL:AFU58999.1}; EC=2.3.1.- {ECO:0000313|EMBL:AFU58999.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Poly(R)-hydroxyalkanoic acid synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN98_NITGG
PLM3-1_50_b1_sep16_scaffold_1159_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3946..4257)
DNA (312bp) protein (104aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IF22_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58375.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1159_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4280..5095)
DNA (816bp) protein (272aa)
Putative alpha/beta hydrolase fold protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IAM1_NITGG
alpha/beta hydrolase fold protein
Putative alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AFU58376.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1159_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5305..6063)
DNA (759bp) protein (253aa)
Putative sulfonate transporter Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFQ8_NITGG
sulfonate transporter
Putative sulfonate transporter {ECO:0000313|EMBL:AFU58650.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1159_8
unknown

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6220..6396
DNA (177bp) protein (59aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1159_9
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6699..7133
DNA (435bp) protein (145aa)
Putative peptidase M50 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IAX7_NITGG
putative membrane-associated Zn-dependent protease
Putative membrane-associated Zn-dependent protease {ECO:0000313|EMBL:AIF84060.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_1159_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7120..7767
DNA (648bp) protein (216aa)
Putative peptidase M50 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IAX7_NITGG
peptidase M50
Putative peptidase M50 {ECO:0000313|EMBL:AFU58491.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1159_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7953..10052
DNA (2100bp) protein (700aa)
Beta-lactamase domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFA9_NITGG
beta-lactamase
Beta-lactamase domain protein {ECO:0000313|EMBL:AFU58490.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1159_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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11038..11730
DNA (693bp) protein (231aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJK2_NITGG
hypothetical protein
ScpA {ECO:0000313|EMBL:ADK25983.1}; Flags: Fragment;; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera gargensis.;"
PLM3-1_50_b1_sep16_scaffold_1159_13
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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11755..12267
DNA (513bp) protein (171aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHP3_NITGG
condensin subunit ScpB
Condensin subunit ScpB {ECO:0000313|EMBL:AIF84118.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_1159_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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12338..12724
DNA (387bp) protein (129aa)
30S ribosomal protein S8e Tax=Candidatus Nitrososphaera gargensis RepID=K0IMZ0_NITGG
rps8e; 30S ribosomal protein S8e
30S ribosomal protein S8e {ECO:0000256|HAMAP-Rule:MF_00029}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1159_15
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12816..13739)
DNA (924bp) protein (308aa)
hemB2; delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Delta-aminolevulinic acid dehydratase Tax=uncultured archaeon RepID=I3RKJ4_9ARCH
PLM3-1_50_b1_sep16_scaffold_1159_16

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13870..14739
DNA (870bp) protein (290aa)
Putative glycosyl transferase family protein Tax=uncultured archaeon RepID=I3RKJ5_9ARCH
Putative glycosyl transferase family protein {ECO:0000313|EMBL:AFK24855.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
glycosyl transferase, family 2
PLM3-1_50_b1_sep16_scaffold_1159_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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14844..15449
DNA (606bp) protein (202aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IK55_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59608.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1159_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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15519..15899
DNA (381bp) protein (127aa)
Translation initiation factor 5A Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INM0_NITGG
eIF-5A; translation initiation factor 5A
Translation initiation factor 5A {ECO:0000256|HAMAP-Rule:MF_00085, ECO:0000256|SAAS:SAAS00016433}; Hypusine-containing protein {ECO:0000256|HAMAP-Rule:MF_00085}; eIF-5A {ECO:0000256|HAMAP-Rule:MF_00085}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1159_19
Candidatus Nitrosopelagicus brevis, Candidatus Nitrosopelagicus, Thaumarchaeota, Archaea

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comp(15959..16474)
DNA (516bp) protein (172aa)
phosphodiesterase family protein (EC:3.1.-.-)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Candidatus Nitrosopelagicus brevis.;"
Phosphodiesterase, MJ0936 family Tax=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) RepID=A6VJ28_METM7
PLM3-1_50_b1_sep16_scaffold_1159_20
CG_Falkow_04, Falkowbacteria, Parcubacteria, Bacteria

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comp(16578..17222)
DNA (645bp) protein (215aa)
Uncharacterized membrane-associated protein Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D0T2_PELTS
DedA; hypothetical protein
Tax=CG_Falkow_04
PLM3-1_50_b1_sep16_scaffold_1159_trna_1
unknown

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comp(17301..17375)
DNA (75bp)
transferRNA Met
PLM3-1_50_b1_sep16_scaffold_1159_21
unknown

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17562..17831
DNA (270bp) protein (90aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1159_22
Prevotella bivia, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(17969..18799)
DNA (831bp) protein (277aa)
Uncharacterized protein Tax=Prevotella bivia RepID=D1XVP8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EIM32187.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella bivia DSM 20514.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_1159_23
RBG_16_Archaea_50_20_curated, Archaea

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18933..19178
DNA (246bp) protein (82aa)
Uncharacterized protein Tax=Leptonema illini DSM 21528 RepID=H2CB71_9LEPT
hypothetical protein
Tax=RBG_16_Archaea_50_20_curated
PLM3-1_50_b1_sep16_scaffold_1159_24
unknown

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comp(19639..19776)
DNA (138bp) protein (46aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1159_25
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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19873..20505
DNA (633bp) protein (211aa)
CBS and Zinc Finger C2H2 domain-containing membrane protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILW0_NITGG
CBS and Zinc Finger C2H2 domain-containing membrane protein
CBS and Zinc Finger C2H2 domain-containing membrane protein {ECO:0000313|EMBL:AFU57394.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1159_26
unknown

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20901..21554
DNA (654bp) protein (218aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1159_27
uncultured crenarchaeote, Crenarchaeota, Archaea

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21948..22295
DNA (348bp) protein (116aa)
Putative nitrogen regulatory protein P II Tax=uncultured crenarchaeote RepID=Q702D5_9CREN
Putative nitrogen regulatory protein P II {ECO:0000313|EMBL:CAF28689.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote.;"
nitrogen regulatory protein P-II
PLM3-1_50_b1_sep16_scaffold_1159_28
uncultured crenarchaeote, Crenarchaeota, Archaea

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22552..23280
DNA (729bp) protein (243aa)
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase {ECO:0000256|HAMAP-Rule:MF_00960}; Short=ADH synthase {ECO:0000256|HAMAP-Rule:MF_00960};; Short=ADHS {ECO:0000256|HAMAP-Rule:MF_00960};; Short=ADTH synthase {ECO:0000256|HAMAP-Rule:MF_00960};; EC=2.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00960};; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote.;"
aroGFH; 3-deoxy-7-phosphoheptulonate synthase (EC:4.1.2.13 2.5.1.54)
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase Tax=uncultured crenarchaeote RepID=Q702D4_9CREN
PLM3-1_50_b1_sep16_scaffold_1159_29
uncultured crenarchaeote, Crenarchaeota, Archaea

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23303..24325
DNA (1023bp) protein (341aa)
3-dehydroquinate synthase II (EC:1.4.1.-)
Putative uncharacterized protein Tax=uncultured crenarchaeote RepID=Q702D3_9CREN
Putative uncharacterized protein {ECO:0000313|EMBL:CAF28691.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote.;"
Displaying items 1-30 of 33 in total

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