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PLM3-1_50_b1_sep16_scaffold_1679

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_1679_1
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2..328)
DNA (327bp) protein (109aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83089.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_1679_2

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comp(387..683)
DNA (297bp) protein (99aa)
Uncharacterized protein Tax=uncultured archaeon RepID=I3RKP2_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AFK24902.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
PLM3-1_50_b1_sep16_scaffold_1679_3
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(680..1324)
DNA (645bp) protein (215aa)
Uncharacterized protein Tax=uncultured archaeon RepID=I3RKP2_9ARCH
membrane protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:AIC17005.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_1679_4

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1417..1578
DNA (162bp) protein (54aa)
Uncharacterized protein Tax=uncultured archaeon RepID=I3RKP0_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AFK24900.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_1679_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1701..1955
DNA (255bp) protein (85aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDI1_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59461.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1679_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2331..3194)
DNA (864bp) protein (288aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJR7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59463.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1679_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3228..4007)
DNA (780bp) protein (260aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEX1_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57343.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1679_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4223..4786)
DNA (564bp) protein (188aa)
Ammonia monooxygenase/methane monooxygenase, subunit C Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMG9_NITGG
amoC2; ammonia monooxygenase/methane monooxygenase subunit C
Ammonia monooxygenase/methane monooxygenase, subunit C {ECO:0000313|EMBL:AFU60272.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1679_9
unknown

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5080..5517
DNA (438bp) protein (146aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1679_10
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5731..6318
DNA (588bp) protein (196aa)
thymidylate kinase (EC:2.7.4.9)
Probable thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Probable thymidylate kinase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDU4_NITGG
PLM3-1_50_b1_sep16_scaffold_1679_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6351..7592
DNA (1242bp) protein (414aa)
Putative metal dependent phosphohydrolase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHZ6_NITGG
metal dependent phosphohydrolase
Putative metal dependent phosphohydrolase {ECO:0000313|EMBL:AFU59555.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1679_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7589..8296
DNA (708bp) protein (236aa)
pyrH; uridylate kinase (EC:2.7.4.22)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00055191}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00055199};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Uridylate kinase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INK9_NITGG
PLM3-1_50_b1_sep16_scaffold_1679_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8511..8828)
DNA (318bp) protein (106aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILL9_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59552.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1679_14
uncultured crenarchaeote, Crenarchaeota, Archaea

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8987..9949
DNA (963bp) protein (321aa)
Sec-independent protein translocase protein TatC Tax=uncultured crenarchaeote RepID=Q702E5_9CREN
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote.;"
tatC; TatC subunit of twin-arginine targeting system
PLM3-1_50_b1_sep16_scaffold_1679_15
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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10049..10981
DNA (933bp) protein (311aa)
DNA polymerase elongation subunit (family B) (EC:2.7.7.7)
DNA polymerase {ECO:0000256|RuleBase:RU000442}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU000442};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
DNA polymerase (Fragment) Tax=uncultured crenarchaeote RepID=Q8NKN7_9CREN
Displaying 15 items

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