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PLM3-1_50_b1_sep16_scaffold_3184

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_3184_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9..2666)
DNA (2658bp) protein (886aa)
ATP-dependent helicase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0II36_NITGG
ATP-dependent helicase
ATP-dependent helicase {ECO:0000313|EMBL:AFU59590.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_3184_2
unknown

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comp(2667..2795)
DNA (129bp) protein (43aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_3184_3
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3190..4101
DNA (912bp) protein (304aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase (EC:2.5.1.- 2.5.1.74)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000313|EMBL:AIF84031.1}; EC=2.5.1.- {ECO:0000313|EMBL:AIF84031.1};; EC=2.5.1.74 {ECO:0000313|EMBL:AIF84031.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
1,4-dihydroxy-2-naphthoate octaprenyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFE9_NITGG
PLM3-1_50_b1_sep16_scaffold_3184_4
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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4185..4640
DNA (456bp) protein (152aa)
birA; biotin-[acetyl-CoA-carboxylase] ligase (EC:6.3.4.15)
Biotin--acetyl-CoA-carboxylase ligase Tax=Thaumarchaeota archaeon N4 RepID=V6ASZ6_9ARCH
Biotin--acetyl-CoA-carboxylase ligase {ECO:0000313|EMBL:CDI05767.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
PLM3-1_50_b1_sep16_scaffold_3184_5
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

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4637..4969
DNA (333bp) protein (111aa)
Biotin-[acetyl-CoA-carboxylase] ligase Tax=Clostridium bolteae RepID=R0AH50_9CLOT
Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
PLM3-1_50_b1_sep16_scaffold_3184_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5549..7381
DNA (1833bp) protein (611aa)
Signal transduction histidine kinase, with phosphoacceptor and ATP binding domain Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICN3_NITGG
signal transduction histidine kinase, with phosphoacceptor and ATP binding domain
Signal transduction histidine kinase, with phosphoacceptor and ATP binding domain {ECO:0000313|EMBL:AFU59131.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_3184_7
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7423..7875)
DNA (453bp) protein (151aa)
ttuD; hydroxypyruvate reductase (EC:1.1.1.81)
Putative hydroxypyruvate reductase {ECO:0000313|EMBL:AIC14817.1}; EC=1.1.1.81 {ECO:0000313|EMBL:AIC14817.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Putative glycerate kinase Tax=uncultured archaeon GZfos3D4 RepID=Q648E2_9ARCH
PLM3-1_50_b1_sep16_scaffold_3184_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7991..8827)
DNA (837bp) protein (279aa)
ttuD; hydroxypyruvate reductase (EC:1.1.1.81)
Putative hydroxypyruvate reductase {ECO:0000313|EMBL:AFU58533.1}; EC=1.1.1.81 {ECO:0000313|EMBL:AFU58533.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative hydroxypyruvate reductase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHV6_NITGG
PLM3-1_50_b1_sep16_scaffold_3184_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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9072..9410
DNA (339bp) protein (113aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFE6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58535.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_3184_10
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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9490..9891
DNA (402bp) protein (134aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHW2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC14811.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_3184_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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10055..11446
DNA (1392bp) protein (464aa)
trpE; anthranilate synthase component 1 (EC:4.1.3.27)
Anthranilate synthase component 1 {ECO:0000313|EMBL:AFU58696.1}; EC=4.1.3.27 {ECO:0000313|EMBL:AFU58696.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Anthranilate synthase component 1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBR4_NITGG
PLM3-1_50_b1_sep16_scaffold_3184_12
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(11502..12368)
DNA (867bp) protein (289aa)
Putative transcriptional regulator, ArsR family Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH22_NITGG
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AIF84242.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_3184_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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12457..13515
DNA (1059bp) protein (353aa)
purM; phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Phosphoribosylformylglycinamidine cyclo-ligase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7S9_NITGG
PLM3-1_50_b1_sep16_scaffold_3184_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(13568..14503)
DNA (936bp) protein (312aa)
Translation initiation factor 2, subunit gamma Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICY3_NITGG
eif2g; translation initiation factor 2, subunit gamma
Translation initiation factor 2, subunit gamma {ECO:0000313|EMBL:AFU57525.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_3184_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(14784..15182)
DNA (399bp) protein (133aa)
30S ribosomal protein S6e Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM30_NITGG
rps6e; 30S ribosomal protein S6e
30S ribosomal protein S6e {ECO:0000256|HAMAP-Rule:MF_00512, ECO:0000256|SAAS:SAAS00018829}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_3184_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(15759..16937)
DNA (1179bp) protein (393aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHL3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58398.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_3184_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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17057..18088
DNA (1032bp) protein (344aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJF7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58397.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_3184_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(18481..18750)
DNA (270bp) protein (90aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHH0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58353.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_3184_19

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18921..19253
DNA (333bp) protein (111aa)
Uncharacterized protein Tax=uncultured archaeon RepID=I3RKN4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AFK24894.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_3184_20
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(19368..19670)
DNA (303bp) protein (101aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGA8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF82502.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_3184_21
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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19833..20357
DNA (525bp) protein (175aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM59_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57584.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_3184_22
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(20468..21208)
DNA (741bp) protein (247aa)
Uncharacterized protein Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D324_9ARCH
ATP-grasp superfamily enzyme
ATP-grasp superfamily enzyme {ECO:0000313|EMBL:AIF85083.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_3184_23
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(21300..22070)
DNA (771bp) protein (257aa)
Uncharacterized protein Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2DZR1_9ARCH
putative Ser/Thr protein kinase
Putative Ser/Thr protein kinase {ECO:0000313|EMBL:AIC16789.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Displaying 23 items

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