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PLM3-1_50_b1_sep16_scaffold_155

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_155_1
unknown

Not on your lists

comp(1..129)
DNA (129bp) protein (43aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_155_2
unknown

Not on your lists

289..450
DNA (162bp) protein (54aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_155_3
Glycine soja, Glycine, Fabales, rosids, Streptophyta, Viridiplantae

Not on your lists

563..742
DNA (180bp) protein (60aa)
Predicted protein Tax=Micromonas sp. (strain RCC299 / NOUM17) RepID=C1E8J4_MICSR
Uncharacterized protein {ECO:0000313|EMBL:KHN46888.1}; species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja.;" source="Glycine soja (Wild soybean).;"
PLM3-1_50_b1_sep16_scaffold_155_4
unknown

Not on your lists

comp(956..1249)
DNA (294bp) protein (98aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_155_5
unknown

Not on your lists

1568..1852
DNA (285bp) protein (95aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_155_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(1883..2569)
DNA (687bp) protein (229aa)
Vacuolar iron transporter family protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGM4_NITGG
vacuolar iron transporter family protein
Vacuolar iron transporter family protein {ECO:0000313|EMBL:AFU58970.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_155_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(2724..3209)
DNA (486bp) protein (162aa)
Putative iron (Metal) dependent repressor, DtxR family Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INA8_NITGG
iron (metal) dependent repressor, DtxR family
Putative iron (Metal) dependent repressor, DtxR family {ECO:0000313|EMBL:AFU59049.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_155_8
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(3241..3489)
DNA (249bp) protein (83aa)
Putative metal cation transporter Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A1P3_NITMS
metal cation transporter
Putative metal cation transporter {ECO:0000313|EMBL:ABX13558.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (strain SCM1).;"
PLM3-1_50_b1_sep16_scaffold_155_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(3518..4447)
DNA (930bp) protein (310aa)
Putative metal cation transporter Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ID07_NITGG
metal cation transporter
Putative metal cation transporter {ECO:0000313|EMBL:AFU59261.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_155_10
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(4447..4938)
DNA (492bp) protein (164aa)
Multicopper oxidase type 3 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH86_NITGG
multicopper oxidase type 3
Multicopper oxidase type 3 {ECO:0000313|EMBL:AIC14243.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_155_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

6160..6537
DNA (378bp) protein (126aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHX4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57502.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_155_12
unknown

Not on your lists

comp(6698..6970)
DNA (273bp) protein (91aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_155_13

Not on your lists

comp(7288..8970)
DNA (1683bp) protein (561aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4XNP7_SORCE
FG-GAP repeat protein
Putative integrin-like protein {ECO:0000313|EMBL:AHE14782.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PLM3-1_50_b1_sep16_scaffold_155_14
unknown

Not on your lists

8987..9130
DNA (144bp) protein (48aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_155_15
unknown

Not on your lists

9072..9347
DNA (276bp) protein (92aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_155_16
R_Peregrinibacteria_39_12, Peregrinibacteria, Bacteria

Not on your lists

comp(9439..9837)
DNA (399bp) protein (133aa)
hypothetical protein bin=ACD5 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=ACD5 organism_group=OD1-i organism_desc=OD1-i
Mannose-6-phosphate isomerase
Tax=RIFCSPLOWO2_01_FULL_Peregrinibacteria_39_12_curated
PLM3-1_50_b1_sep16_scaffold_155_17
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(9982..10788)
DNA (807bp) protein (269aa)
type 11 methyltransferase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Methyltransferase type 11
Tax=CSP1_1_Thaumarchaeota
PLM3-1_50_b1_sep16_scaffold_155_18
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

11097..11537
DNA (441bp) protein (147aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AU86_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06346.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
PLM3-1_50_b1_sep16_scaffold_155_19
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(11606..11980)
DNA (375bp) protein (125aa)
Rieske (2Fe-2S) domain protein Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GHL1_METPE
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase {ECO:0000313|EMBL:AIF85063.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_155_20
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(12219..12593)
DNA (375bp) protein (125aa)
RDD family protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I736_NITGG
RDD family protein
RDD family protein {ECO:0000313|EMBL:AIC15372.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_155_21
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

12753..13196
DNA (444bp) protein (148aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00036BEEE1
PPOX class probable F420-dependent enzyme, MSMEG_5819 family
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM3-1_50_b1_sep16_scaffold_155_22
unknown

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comp(13699..14352)
DNA (654bp) protein (218aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_155_23
unknown

Not on your lists

14694..16106
DNA (1413bp) protein (471aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_155_24
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16166..16846
DNA (681bp) protein (227aa)
Uncharacterized protein Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXH1_METHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB49791.1}; Flags: Precursor;; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
PLM3-1_50_b1_sep16_scaffold_155_25
unknown

Not on your lists

comp(16828..17391)
DNA (564bp) protein (188aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_155_26
unknown

Not on your lists

17683..18399
DNA (717bp) protein (239aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_155_27
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18717..19136
DNA (420bp) protein (140aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003797F2A
Uncharacterized protein {ECO:0000313|EMBL:ELZ86097.1}; species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_155_28
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(19504..19740)
DNA (237bp) protein (79aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGF4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60476.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_155_29
unknown

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19876..20019
DNA (144bp) protein (48aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_155_30
unknown

Not on your lists

comp(20016..20117)
DNA (102bp) protein (34aa)

This feature has no annotations

Displaying items 1-30 of 59 in total

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