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PLM3-1_50_b1_sep16_scaffold_445

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_445_1
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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179..925
DNA (747bp) protein (249aa)
Uncharacterized protein Tax=Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) RepID=A8MAX5_CALMQ
hypothetical protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM3-1_50_b1_sep16_scaffold_445_2
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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927..1787
DNA (861bp) protein (287aa)
ketopantoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
3-methyl-2-oxobutanoate hydroxymethyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9Q1_NITGG
PLM3-1_50_b1_sep16_scaffold_445_3
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1790..2710
DNA (921bp) protein (307aa)
coaBC; coenzyme A biosynthesis bifunctional protein coaBC (EC:4.1.1.36 6.3.2.5)
Coenzyme A biosynthesis bifunctional protein coaBC {ECO:0000313|EMBL:AIC15423.1}; EC=4.1.1.36 {ECO:0000313|EMBL:AIC15423.1};; EC=6.3.2.5 {ECO:0000313|EMBL:AIC15423.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Coenzyme A biosynthesis bifunctional protein coaBC Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE45_NITGG
PLM3-1_50_b1_sep16_scaffold_445_4
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2667..2984
DNA (318bp) protein (106aa)
coaBC; coenzyme A biosynthesis bifunctional protein coaBC (EC:4.1.1.36 6.3.2.5)
Coenzyme A biosynthesis bifunctional protein coaBC {ECO:0000313|EMBL:AIC15423.1}; EC=4.1.1.36 {ECO:0000313|EMBL:AIC15423.1};; EC=6.3.2.5 {ECO:0000313|EMBL:AIC15423.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Coenzyme A biosynthesis bifunctional protein coaBC Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE45_NITGG
PLM3-1_50_b1_sep16_scaffold_445_5
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2996..4072)
DNA (1077bp) protein (359aa)
Xaa-Pro aminopeptidase (EC:3.4.13.9)
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:AIF84647.1}; EC=3.4.13.9 {ECO:0000313|EMBL:AIF84647.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Putative creatinase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGS1_NITGG
PLM3-1_50_b1_sep16_scaffold_445_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4174..5298
DNA (1125bp) protein (375aa)
Putative uncharacterized aminotransferase OR putativesoluble hydrogenase, small subunit Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9P6_NITGG
aminotransferase OR putativesoluble hydrogenase, small subunit
Putative uncharacterized aminotransferase OR putativesoluble hydrogenase, small subunit {ECO:0000313|EMBL:AFU58041.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_445_7
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5352..6092
DNA (741bp) protein (247aa)
FKBP-type peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE41_NITGG
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_445_8
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6014..7168)
DNA (1155bp) protein (385aa)
egsA; glycerol-1-phosphate dehydrogenase (EC:1.1.1.261)
Glycerol-1-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00497, ECO:0000256|SAAS:SAAS00015263}; Short=G1P dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00497};; Short=G1PDH {ECO:0000256|HAMAP-Rule:MF_00497};; EC=1.1.1.261 {ECO:0000256|HAMAP-Rule:MF_00497, ECO:0000256|SAAS:SAAS00015268};; Enantiomeric glycerophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00497}; sn-glycerol-1-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00497}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Glycerol-1-phosphate dehydrogenase [NAD(P)+] Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJF2_NITGG
PLM3-1_50_b1_sep16_scaffold_445_9
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7414..9288
DNA (1875bp) protein (625aa)
Beta-lactamase domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH94_NITGG
Putative beta-lactamase domain-containing metal-dependent RNase
Putative beta-lactamase domain-containing metal-dependent RNase {ECO:0000313|EMBL:AIC14228.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_445_10
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9302..9574)
DNA (273bp) protein (91aa)
Uncharacterized protein Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KLR7_9ARCH
putative protein of unknown function DUF552
Uncharacterized protein {ECO:0000313|EMBL:AIC14227.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_445_11
unknown

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comp(9926..10246)
DNA (321bp) protein (107aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_445_12
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(10243..11550)
DNA (1308bp) protein (436aa)
Putative amidophosphoribosyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHM1_NITGG
putative amidophosphoribosyltransferase
Putative amidophosphoribosyltransferase {ECO:0000313|EMBL:AIC14957.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_445_13
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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12407..13318
DNA (912bp) protein (304aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CZ75_9ARCH
putative ring-cleavage extradiol dioxygenase
Putative ring-cleavage extradiol dioxygenase {ECO:0000313|EMBL:AIF82673.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_445_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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13561..14760
DNA (1200bp) protein (400aa)
GTP binding protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILI1_NITGG
GTP binding protein
GTP binding protein {ECO:0000313|EMBL:AFU57094.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_445_15
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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14766..15782
DNA (1017bp) protein (339aa)
Putative metalloendopeptidase glycoprotease family Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IC21_NITGG
putative glycoprotease family metalloendopeptidase
Putative glycoprotease family metalloendopeptidase {ECO:0000313|EMBL:AIC15598.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_445_16
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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15895..16512
DNA (618bp) protein (206aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILX7_NITGG
plastocyanin
Plastocyanin {ECO:0000313|EMBL:AIF82214.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_445_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(16617..16973)
DNA (357bp) protein (119aa)
GRAM domain-containing protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I751_NITGG
GRAM domain-containing protein
GRAM domain-containing protein {ECO:0000313|EMBL:AFU57096.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_445_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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17162..17602
DNA (441bp) protein (147aa)
Putative Mn2+-dependent serine/threonine protein kinase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH02_NITGG
Mn2+-dependent serine/threonine protein kinase
Putative Mn2+-dependent serine/threonine protein kinase {ECO:0000313|EMBL:AFU57097.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_445_19
unknown

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17958..18188
DNA (231bp) protein (77aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_445_20
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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19083..19592
DNA (510bp) protein (170aa)
dITPase (EC:3.6.1.19)
DITPase {ECO:0000313|EMBL:AIF84797.1}; EC=3.6.1.19 {ECO:0000313|EMBL:AIF84797.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D1S0_9ARCH
PLM3-1_50_b1_sep16_scaffold_445_21
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(19617..20657)
DNA (1041bp) protein (347aa)
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase {ECO:0000256|HAMAP-Rule:MF_01921}; EC=4.1.3.44 {ECO:0000256|HAMAP-Rule:MF_01921};; tRNA wyosine derivatives biosynthesis protein Taw1 {ECO:0000256|HAMAP-Rule:MF_01921}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Wyosine base formation domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILI4_NITGG
wyosine biosynthesis protein TYW1
PLM3-1_50_b1_sep16_scaffold_445_22
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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20863..21675
DNA (813bp) protein (271aa)
NIFsuperfamily domain-containing protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IC27_NITGG
NIFsuperfamily domain-containing protein
NIFsuperfamily domain-containing protein {ECO:0000313|EMBL:AFU57100.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_445_trna_1
unknown

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21730..21839
DNA (110bp)
transferRNA His
PLM3-1_50_b1_sep16_scaffold_445_23
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(21898..22941)
DNA (1044bp) protein (348aa)
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase {ECO:0000313|EMBL:AIF82114.1}; EC=2.4.1.227 {ECO:0000313|EMBL:AIF82114.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Glycosyltransferase 28 domain-containing protein Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CYV9_9ARCH
PLM3-1_50_b1_sep16_scaffold_445_24
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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23181..23519
DNA (339bp) protein (113aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INU7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59994.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_445_25
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

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23862..24683
DNA (822bp) protein (274aa)
Hyalin Tax=Chloroflexus RepID=A9WIM4_CHLAA
Hyalin
Tax=RBG_16_Chloroflexi_57_11_curated
PLM3-1_50_b1_sep16_scaffold_445_26
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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24652..26277
DNA (1626bp) protein (542aa)
PKD domain containing protein Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GF92_METPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB43863.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina vacuolata Z-761.;"
PLM3-1_50_b1_sep16_scaffold_445_27
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(26420..27754)
DNA (1335bp) protein (445aa)
Putative quinoprotein glucose/ sorbosone dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILJ9_NITGG
quinoprotein glucose/sorbosone dehydrogenase
Putative quinoprotein glucose/ sorbosone dehydrogenase {ECO:0000313|EMBL:AFU60468.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_445_28
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(27898..28719)
DNA (822bp) protein (274aa)
dienelactone hydrolase-like enzyme (EC:3.1.1.45)
Dienelactone hydrolase-like enzyme {ECO:0000313|EMBL:AIF85163.1}; EC=3.1.1.45 {ECO:0000313|EMBL:AIF85163.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Dienelactone hydrolase Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KI50_9ARCH
PLM3-1_50_b1_sep16_scaffold_445_29
archaeon Loki, Lokiarchaeota, Archaea

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comp(28848..29486)
DNA (639bp) protein (213aa)
hypothetical protein Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034B3CA6
8-hydroxy-5-deazaflavin:NADPH oxidoreductase {ECO:0000313|EMBL:KKK40593.1}; species="Archaea; Lokiarchaeota; 'Lokiarchaeum'.;" source="archaeon Loki.;"
NADP oxidoreductase, coenzyme F420-dependent
Displaying items 1-30 of 38 in total

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