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PLM3-1_50_b1_sep16_scaffold_454

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_454_1
RLO_WOR_2_51_24, WOR-2, Bacteria

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3..431
DNA (429bp) protein (143aa)
HNH endonuclease Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B53AF3
HNH endonuclease
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
PLM3-1_50_b1_sep16_scaffold_454_trna_1
unknown

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926..1000
DNA (75bp)
transferRNA Val
PLM3-1_50_b1_sep16_scaffold_454_2
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1155..2984
DNA (1830bp) protein (610aa)
sir; putative ferredoxin-dependent sulfite reductase (EC:1.8.7.1)
Putative ferredoxin-dependent sulfite reductase {ECO:0000313|EMBL:AIC16783.1}; EC=1.8.7.1 {ECO:0000313|EMBL:AIC16783.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Ferredoxin-sulfite/nitrite reductase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0II05_NITGG
PLM3-1_50_b1_sep16_scaffold_454_3
uncultured crenarchaeote 29d5, Crenarchaeota, Archaea

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2972..3733
DNA (762bp) protein (254aa)
Rhodanese-related sulfurtransferase Tax=uncultured crenarchaeote 29d5 RepID=D4N6W4_9CREN
Rhodanese-related sulfurtransferase {ECO:0000313|EMBL:ACY24449.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 29d5.;"
rhodanese sulfurtransferase
PLM3-1_50_b1_sep16_scaffold_454_4
uncultured crenarchaeote 29d5, Crenarchaeota, Archaea

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comp(3677..4336)
DNA (660bp) protein (220aa)
TfuA domain-containing protein Tax=uncultured crenarchaeote 29d5 RepID=D4N6W5_9CREN
TfuA domain-containing protein {ECO:0000313|EMBL:ACY24451.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 29d5.;"
TfuA domain-containing protein, core
PLM3-1_50_b1_sep16_scaffold_454_5
uncultured crenarchaeote 29d5, Crenarchaeota, Archaea

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comp(4333..5655)
DNA (1323bp) protein (441aa)
Uncharacterized conserved protein Tax=uncultured crenarchaeote 29d5 RepID=D4N6W6_9CREN
Uncharacterized conserved protein {ECO:0000313|EMBL:ACY24452.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 29d5.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_454_6
uncultured crenarchaeote 29d5, Crenarchaeota, Archaea

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comp(6121..7770)
DNA (1650bp) protein (550aa)
pheT; phenylalanine--tRNA ligase beta chain (EC:6.1.1.20)
Phenylalanyl-tRNA synthetase beta subunit Tax=uncultured crenarchaeote 29d5 RepID=D4N6W8_9CREN
Phenylalanyl-tRNA synthetase beta subunit {ECO:0000313|EMBL:ACY24454.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 29d5.;"
PLM3-1_50_b1_sep16_scaffold_454_7
uncultured crenarchaeote 29d5, Crenarchaeota, Archaea

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comp(7758..9281)
DNA (1524bp) protein (508aa)
pheS; phenylalanine--tRNA ligase subunit alpha (EC:6.1.1.20)
Phenylalanyl-tRNA synthetase alpha subunit Tax=uncultured crenarchaeote 29d5 RepID=D4N6W9_9CREN
Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000313|EMBL:ACY24455.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 29d5.;"
PLM3-1_50_b1_sep16_scaffold_454_8
uncultured crenarchaeote 29d5, Crenarchaeota, Archaea

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9353..10492
DNA (1140bp) protein (380aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase Tax=uncultured crenarchaeote 29d5 RepID=D4N6X0_9CREN
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:ACY24456.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 29d5.;"
PLM3-1_50_b1_sep16_scaffold_454_9
uncultured crenarchaeote 76h13, Crenarchaeota, Archaea

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10479..10787
DNA (309bp) protein (103aa)
Uncharacterized conserved protein Tax=uncultured crenarchaeote 76h13 RepID=D4N751_9CREN
Uncharacterized conserved protein {ECO:0000313|EMBL:ACY24537.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 76h13.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_454_10
uncultured crenarchaeote 76h13, Crenarchaeota, Archaea

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comp(10890..11357)
DNA (468bp) protein (156aa)
Predicted nucleotidyltransferase Tax=uncultured crenarchaeote 76h13 RepID=D4N752_9CREN
Predicted nucleotidyltransferase {ECO:0000313|EMBL:ACY24538.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 76h13.;"
cytidyltransferase-like protein
PLM3-1_50_b1_sep16_scaffold_454_11
uncultured crenarchaeote 29d5, Crenarchaeota, Archaea

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comp(11392..12012)
DNA (621bp) protein (207aa)
Ferredoxin Tax=uncultured crenarchaeote 29d5 RepID=D4N6X3_9CREN
Ferredoxin {ECO:0000313|EMBL:ACY24459.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 29d5.;"
ferredoxin
PLM3-1_50_b1_sep16_scaffold_454_12
uncultured crenarchaeote 76h13, Crenarchaeota, Archaea

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12217..12879
DNA (663bp) protein (221aa)
Ubiquinone/menaquinone biosynthesis methyltransferase Tax=uncultured crenarchaeote 76h13 RepID=D4N754_9CREN
Ubiquinone/menaquinone biosynthesis methyltransferase {ECO:0000313|EMBL:ACY24540.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 76h13.;"
ubiE1; ubiquinone/menaquinone biosynthesis methyltransferase UbiE
PLM3-1_50_b1_sep16_scaffold_454_13
uncultured crenarchaeote 29d5, Crenarchaeota, Archaea

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13077..13307
DNA (231bp) protein (77aa)
Uncharacterized conserved protein Tax=uncultured crenarchaeote 29d5 RepID=D4N6X5_9CREN
Uncharacterized conserved protein {ECO:0000313|EMBL:ACY24461.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 29d5.;"
PLM3-1_50_b1_sep16_scaffold_454_14
uncultured crenarchaeote 29d5, Crenarchaeota, Archaea

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13591..13938
DNA (348bp) protein (116aa)
Uncharacterized conserved protein Tax=uncultured crenarchaeote 29d5 RepID=D4N6X6_9CREN
Uncharacterized conserved protein {ECO:0000313|EMBL:ACY24462.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 29d5.;"
PLM3-1_50_b1_sep16_scaffold_454_15
uncultured crenarchaeote 29d5, Crenarchaeota, Archaea

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14010..16130
DNA (2121bp) protein (707aa)
CoA-binding domain-containing protein Tax=uncultured crenarchaeote 29d5 RepID=D4N6X7_9CREN
CoA-binding domain-containing protein {ECO:0000313|EMBL:ACY24463.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 29d5.;"
acyl-CoA synthetase (NDP forming)
PLM3-1_50_b1_sep16_scaffold_454_16
uncultured crenarchaeote 76h13, Crenarchaeota, Archaea

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16224..16574
DNA (351bp) protein (117aa)
Putative iron-sulfur cluster assembly accessory protein Tax=uncultured crenarchaeote 76h13 RepID=D4N758_9CREN
Putative iron-sulfur cluster assembly accessory protein {ECO:0000313|EMBL:ACY24544.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 76h13.;"
Iron-sulfur cluster assembly accessory protein
PLM3-1_50_b1_sep16_scaffold_454_17
uncultured crenarchaeote 29d5, Crenarchaeota, Archaea

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comp(16649..17914)
DNA (1266bp) protein (422aa)
gdhA; glutamate dehydrogenase (EC:1.4.1.3)
Glutamate dehydrogenase Tax=uncultured crenarchaeote 29d5 RepID=D4N6X9_9CREN
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 29d5.;"
PLM3-1_50_b1_sep16_scaffold_454_18
uncultured crenarchaeote 29d5, Crenarchaeota, Archaea

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comp(17972..18298)
DNA (327bp) protein (109aa)
Sec-independent protein secretion pathway component Tax=uncultured crenarchaeote 29d5 RepID=D4N6Y0_9CREN
Sec-independent protein secretion pathway component {ECO:0000313|EMBL:ACY24466.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 29d5.;"
tatA1; TatA subunit of twin-arginine targeting system
PLM3-1_50_b1_sep16_scaffold_454_19
uncultured crenarchaeote 76h13, Crenarchaeota, Archaea

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18504..18902
DNA (399bp) protein (133aa)
TOPRIM domain-containing protein Tax=uncultured crenarchaeote 76h13 RepID=D4N761_9CREN
TOPRIM domain-containing protein {ECO:0000313|EMBL:ACY24547.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 76h13.;"
small primase-like protein with Toprim domain
PLM3-1_50_b1_sep16_scaffold_454_20
uncultured crenarchaeote 29d5, Crenarchaeota, Archaea

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18971..20209
DNA (1239bp) protein (413aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506};; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 29d5.;"
sufS; cysteine desulfurase/selenocysteine lyase (EC:2.8.1.7)
Cysteine desulfurase Tax=uncultured crenarchaeote 29d5 RepID=D4N6Y2_9CREN
PLM3-1_50_b1_sep16_scaffold_454_21
uncultured crenarchaeote 29d5, Crenarchaeota, Archaea

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20206..20634
DNA (429bp) protein (143aa)
NifU family SUF system FeS assembly protein Tax=uncultured crenarchaeote 29d5 RepID=D4N6Y3_9CREN
NifU family SUF system FeS assembly protein {ECO:0000313|EMBL:ACY24469.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 29d5.;"
nifU; SUF system FeS cluster assembly protein
PLM3-1_50_b1_sep16_scaffold_454_22
uncultured crenarchaeote 76h13, Crenarchaeota, Archaea

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20754..21392
DNA (639bp) protein (213aa)
Putative PAP2 superfamily protein Tax=uncultured crenarchaeote 76h13 RepID=D4N764_9CREN
Putative PAP2 superfamily protein {ECO:0000313|EMBL:ACY24550.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 76h13.;"
phosphoesterase PA-phosphatase
PLM3-1_50_b1_sep16_scaffold_454_23
uncultured crenarchaeote 76h13, Crenarchaeota, Archaea

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comp(21409..21729)
DNA (321bp) protein (107aa)
Uncharacterized conserved protein Tax=uncultured crenarchaeote 76h13 RepID=D4N765_9CREN
Uncharacterized conserved protein {ECO:0000313|EMBL:ACY24551.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 76h13.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_454_24
uncultured crenarchaeote 29d5, Crenarchaeota, Archaea

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22012..23229
DNA (1218bp) protein (406aa)
top1; DNA topoisomerase IB (EC:5.99.1.2)
DNA topoisomerase IB Tax=uncultured crenarchaeote 29d5 RepID=D4N6Y6_9CREN
DNA topoisomerase IB {ECO:0000313|EMBL:ACY24472.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 29d5.;"
PLM3-1_50_b1_sep16_scaffold_454_25
uncultured crenarchaeote 29d5, Crenarchaeota, Archaea

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23369..24781
DNA (1413bp) protein (471aa)
Uncharacterized membrane-associated protein Tax=uncultured crenarchaeote 29d5 RepID=D4N6Y7_9CREN
Uncharacterized membrane-associated protein {ECO:0000313|EMBL:ACY24473.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 29d5.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_454_26
uncultured crenarchaeote 29d5, Crenarchaeota, Archaea

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comp(24839..25645)
DNA (807bp) protein (269aa)
Mannosyl-3-phosphoglycerate phosphatase Tax=uncultured crenarchaeote 29d5 RepID=D4N6Z8_9CREN
Mannosyl-3-phosphoglycerate phosphatase {ECO:0000313|EMBL:ACY24484.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 29d5.;"
mannosyl-3-phosphoglycerate phosphatase
PLM3-1_50_b1_sep16_scaffold_454_27
uncultured crenarchaeote 29d5, Crenarchaeota, Archaea

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comp(25840..26466)
DNA (627bp) protein (209aa)
Uncharacterized conserved protein Tax=uncultured crenarchaeote 29d5 RepID=D4N6Z9_9CREN
Uncharacterized conserved protein {ECO:0000313|EMBL:ACY24485.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 29d5.;"
PLM3-1_50_b1_sep16_scaffold_454_28
uncultured crenarchaeote 76h13, Crenarchaeota, Archaea

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comp(26591..26899)
DNA (309bp) protein (103aa)
Uncharacterized conserved protein Tax=uncultured crenarchaeote 76h13 RepID=D4N772_9CREN
Uncharacterized conserved protein {ECO:0000313|EMBL:ACY24558.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 76h13.;"
PLM3-1_50_b1_sep16_scaffold_454_29
uncultured crenarchaeote 29d5, Crenarchaeota, Archaea

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27038..27832
DNA (795bp) protein (265aa)
cbiHC; precorrin-3B methylase (EC:2.1.1.- 5.4.1.-)
Precorrin-3B methylase Tax=uncultured crenarchaeote 29d5 RepID=D4N701_9CREN
Precorrin-3B methylase {ECO:0000313|EMBL:ACY24487.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 29d5.;"
Displaying items 1-30 of 40 in total

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