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PLM3-1_50_b1_sep16_scaffold_509

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_509_1

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comp(1..570)
DNA (570bp) protein (190aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IAI0_NITGG
Uncharacterized protein {ECO:0000313|EMBL:AIF18798.1}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_84_E02.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_509_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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614..1399
DNA (786bp) protein (262aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ66_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58252.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_509_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1584..2603
DNA (1020bp) protein (340aa)
galT; UDP-glucose-hexose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Putative UDP-glucose-hexose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:AFU58468.1}; EC=2.7.7.12 {ECO:0000313|EMBL:AFU58468.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative UDP-glucose-hexose-1-phosphate uridylyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHP8_NITGG
PLM3-1_50_b1_sep16_scaffold_509_4
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2637..3086
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJL7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC14896.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_509_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3083..4549
DNA (1467bp) protein (489aa)
wecB; UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
Putative UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:AFU58473.1}; EC=5.1.3.14 {ECO:0000313|EMBL:AFU58473.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative UDP-N-acetylglucosamine 2-epimerase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHQ2_NITGG
PLM3-1_50_b1_sep16_scaffold_509_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4550..5800)
DNA (1251bp) protein (417aa)
glucosamine-1-phosphate N-acetyltransferase (EC:2.3.1.157)
Putative glucosamine-1-phosphate N-acetyltransferase {ECO:0000313|EMBL:AFU58474.1}; EC=2.3.1.157 {ECO:0000313|EMBL:AFU58474.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative glucosamine-1-phosphate N-acetyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMZ3_NITGG
PLM3-1_50_b1_sep16_scaffold_509_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5804..6511)
DNA (708bp) protein (236aa)
Nucleotidyl-transferasse Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IF97_NITGG
nucleotidyl-transferasse
Nucleotidyl-transferasse {ECO:0000313|EMBL:AFU58475.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_509_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6557..7909)
DNA (1353bp) protein (451aa)
thiD; phosphomethylpyrimidine kinase (EC:2.7.4.7 2.7.1.49)
Putative phosphomethylpyrimidine kinase {ECO:0000313|EMBL:AFU58476.1}; EC=2.7.1.49 {ECO:0000313|EMBL:AFU58476.1};; EC=2.7.4.7 {ECO:0000313|EMBL:AFU58476.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative phosphomethylpyrimidine kinase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IAW6_NITGG
PLM3-1_50_b1_sep16_scaffold_509_9
unknown

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comp(8218..8604)
DNA (387bp) protein (129aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_509_10
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8843..9304)
DNA (462bp) protein (154aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKZ1_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC14315.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_509_11
RBG_16_Archaea_50_20_curated, Archaea

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9510..10199
DNA (690bp) protein (230aa)
hypothetical protein Tax=candidate division YNPFFA RepID=UPI000360E156
glycine cleavage system protein H
Tax=RBG_16_Archaea_50_20_curated
PLM3-1_50_b1_sep16_scaffold_509_12
RBG_16_Archaea_50_20_curated, Archaea

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comp(10271..11107)
DNA (837bp) protein (279aa)
thiosulfate sulfurtransferase (EC:2.8.1.1)
hypothetical protein Tax=candidate division YNPFFA RepID=UPI0003667B15
Tax=RBG_16_Archaea_50_20_curated
PLM3-1_50_b1_sep16_scaffold_509_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(11218..11715)
DNA (498bp) protein (166aa)
nuoI; NADH-quinone oxidoreductase subunit I (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit I {ECO:0000313|EMBL:AFU58097.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AFU58097.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
NADH-quinone oxidoreductase subunit I Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIY7_NITGG
PLM3-1_50_b1_sep16_scaffold_509_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(11826..13100)
DNA (1275bp) protein (425aa)
Putative quinoprotein glucose/ sorbosone dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJY2_NITGG
quinoprotein glucose/sorbosone dehydrogenase
Putative quinoprotein glucose/ sorbosone dehydrogenase {ECO:0000313|EMBL:AFU58582.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_509_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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13334..14764
DNA (1431bp) protein (477aa)
Putative FeS cluster assembly protein sufD Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIT6_NITGG
sufD; FeS cluster assembly protein sufD
Putative FeS cluster assembly protein sufD {ECO:0000313|EMBL:AFU58027.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_509_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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14845..15108
DNA (264bp) protein (88aa)
Rieske [2Fe-2S] iron-sulfur domain-containing protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGR4_NITGG
rieske [2Fe-2S] iron-sulfur domain-containing protein
Rieske [2Fe-2S] iron-sulfur domain-containing protein {ECO:0000313|EMBL:AFU58028.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_509_17
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(15123..15653)
DNA (531bp) protein (177aa)
Putative signal peptidase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJU8_NITGG
putative signal peptidase I
Putative signal peptidase I {ECO:0000313|EMBL:AIC16011.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_509_18
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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15761..16174
DNA (414bp) protein (138aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM21_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC15897.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_509_19
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(16181..16693)
DNA (513bp) protein (171aa)
50S ribosomal protein L15e Tax=Candidatus Nitrososphaera gargensis RepID=K0IDZ5_NITGG
LSU ribosomal protein L15E
LSU ribosomal protein L15E {ECO:0000313|EMBL:AIF82825.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_509_20
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(16745..17677)
DNA (933bp) protein (311aa)
serA; 2-hydroxyacid dehydrogenase (EC:1.1.1.95)
2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:AFU59597.1}; EC=1.1.1.95 {ECO:0000313|EMBL:AFU59597.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
2-hydroxyacid dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILP9_NITGG
PLM3-1_50_b1_sep16_scaffold_509_21
unknown

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comp(17728..18081)
DNA (354bp) protein (118aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_509_22
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(18183..19571)
DNA (1389bp) protein (463aa)
fumC; fumarate hydratase (EC:4.3.1.1)
Putative fumarate hydratase {ECO:0000313|EMBL:AFU59599.1}; EC=4.3.1.1 {ECO:0000313|EMBL:AFU59599.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative fumarate hydratase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INL8_NITGG
PLM3-1_50_b1_sep16_scaffold_509_23
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(19696..20115)
DNA (420bp) protein (140aa)
Uncharacterized protein Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KN21_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EGG41254.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia SFB1.;"
secondary thiamine-phosphate synthase enzyme
PLM3-1_50_b1_sep16_scaffold_509_24
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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20213..21832
DNA (1620bp) protein (540aa)
Putative streptogramin lyase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN59_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83713.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_509_25
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(21834..22562)
DNA (729bp) protein (243aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Phosphoglycerate kinase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKB7_NITGG
PLM3-1_50_b1_sep16_scaffold_509_26
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(22528..22941)
DNA (414bp) protein (138aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Phosphoglycerate kinase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKB7_NITGG
PLM3-1_50_b1_sep16_scaffold_509_27
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(23036..23446)
DNA (411bp) protein (137aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJN5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84059.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Displaying 27 items

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