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PLM3-1_50_b1_sep16_scaffold_454_32

Organism: PLM6_50_b1_sep16_Thaumarchaeota_Marine_Group_I_36_8

near complete RP 33 / 55 MC: 3 BSCG 19 / 51 MC: 2 ASCG 37 / 38 MC: 1
Location: comp(29380..30852)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 29d5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 490.0
  • Bit_score: 904
  • Evalue 4.70e-260
tRNA-splicing ligase RtcB Tax=uncultured crenarchaeote 29d5 RepID=D4N704_9CREN similarity UNIREF
DB: UNIREF100
  • Identity: 89.8
  • Coverage: 490.0
  • Bit_score: 904
  • Evalue 3.40e-260
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 74.5
  • Coverage: 491.0
  • Bit_score: 758
  • Evalue 6.50e-217

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Taxonomy

uncultured crenarchaeote 29d5 → Crenarchaeota → Archaea

Sequences

DNA sequence
Length: 1473
ATGAAAAATTTGATTACGCGAGTCGGAAACCATGAAGTAGTAAAGGAGGGAGATTTCAGGTATGTGGTTAAGAAGGATGAATCTAAAGGGATGATGGTTCCGGTTACAATCTACGCAGATGATAGTCTTATATCAAAAATGGCATTGGATAGAACTATTGATCAGGCGGCTAATGTCGCCACGTTAAAAGGGGTTATGAAACACGTTGTGGTATTGCCCGATGGCCATGAGGGATACGGTTTTCCAGTGGGTGGAGTAGCAGGAATGGATCTAGAAGAAGGAGTAATTAGCCCGGGAGGAGTAGGCTACGATATTAACTGTGGCGTCAGATTGATACGGACGAACTTACGAGAAAAAGAAGTTCGTCCAAAGCTCAAGGATCTTGTAAATGAGTTGTTTGATGCCATTCCAGCTGGAGTTGGTAGCTCCAGTTCAAGAAAGGTCACCGGGTCAGAACTAGACGATCTGCTTATTGAAGGTGTGAAATGGACTGTTCAAAACGGTTATGGGCTGGATTCTGATATTGACGTGTGTGAAGAAAATGGCTGTATGAAAGGGGCCGATCCCGCAAGCGTATCTGAACATGCTAAGAAAAGAGGAGGGCTTCAATTGGGCACACTTGGTTCGGGGAATCATTTTCTAGAATTGCAAAAAGTAGACAAGATTTTTGATGAAAGAGCAGCAAAAGCAATGGGAATAGAACAAGGTCAGGTTACTGTTCTAATACACTGTGGATCCAGGGGATTTGGTCACCAGGTTTGCAGTGATTATTTGAAAATTTCAGAAAAAAAAATTAGGGATTCTGGTATTAGAATTGTTGATAGAGAATTGGCATGCGTTCCAAATAACTCTAACGAAGGTGAGAGCTATAGAAAGGCAATGTATTCTGCGCTTAATTTTGCGTGGTCAAATAGACAAATGATTACGCATTGGACAAGAGATACGTTTGAAAAGGTAATGAGAATGACCGAAGCTGACTTGGACATGAAGTTAGTTTACGATGTTTCACATAACATAGCAAAAGTTGAAAGGCATGCCGTAGATGGTGAAGGGACTAGAGACTTGGTAATACATAGAAAGGGTGCCACAAGAGCATTCCCGGCAGGGGACAGCCATATTCCAGACAAATATCGGGACATCGGTCAACCAATTTTTATTCCAGGCTCAATGGGCACTGCAAGCTGGATACTTCTTGGGAATTCAAAATCATTGGAGTTAAGTTTTGGATCTACTGCACATGGCGCAGGTAGAACAATGTCCAGATCTGCAGCAAGGAGAAACTACACAACTGAAAGCGTAAGAAAAAATTTAGAGTCAAAGGGAATTTACATAAAGGCACTAAGCAGGGAAGGAATGGTCGAAGAAACCCCTGAAGCATACAAAGATGTCGACTCAGTTGTTGAAGTGTCGCATTCTCTTGGAATTGCCACAAAGGTGGCACGCTTAGTTCCAATTGGGGTGATTAAGGGATGA
PROTEIN sequence
Length: 491
MKNLITRVGNHEVVKEGDFRYVVKKDESKGMMVPVTIYADDSLISKMALDRTIDQAANVATLKGVMKHVVVLPDGHEGYGFPVGGVAGMDLEEGVISPGGVGYDINCGVRLIRTNLREKEVRPKLKDLVNELFDAIPAGVGSSSSRKVTGSELDDLLIEGVKWTVQNGYGLDSDIDVCEENGCMKGADPASVSEHAKKRGGLQLGTLGSGNHFLELQKVDKIFDERAAKAMGIEQGQVTVLIHCGSRGFGHQVCSDYLKISEKKIRDSGIRIVDRELACVPNNSNEGESYRKAMYSALNFAWSNRQMITHWTRDTFEKVMRMTEADLDMKLVYDVSHNIAKVERHAVDGEGTRDLVIHRKGATRAFPAGDSHIPDKYRDIGQPIFIPGSMGTASWILLGNSKSLELSFGSTAHGAGRTMSRSAARRNYTTESVRKNLESKGIYIKALSREGMVEETPEAYKDVDSVVEVSHSLGIATKVARLVPIGVIKG*