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PLM3-1_50_b1_sep16_scaffold_4861

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_4861_1
Deinococcus phoenicis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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1..219
DNA (219bp) protein (73aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus phoenicis.;"
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
glucose-6-phosphate isomerase Tax=Saccharopolyspora spinosa RepID=UPI0002379905
PLM3-1_50_b1_sep16_scaffold_4861_2
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

362..1165
DNA (804bp) protein (268aa)
Cof protein Tax=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) RepID=A0R0M1_MYCS2
Haloacid dehalogenase {ECO:0000313|EMBL:KJK57820.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
haloacid dehalogenase
PLM3-1_50_b1_sep16_scaffold_4861_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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1180..2214
DNA (1035bp) protein (345aa)
6-phosphogluconate dehydrogenase, decarboxylating Tax=Mycobacterium rhodesiae (strain NBB3) RepID=G8RR31_MYCRN
6-phosphogluconate dehydrogenase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_4861_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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2217..2879
DNA (663bp) protein (221aa)
6-phosphogluconolactonase Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7W7_ANADF
6-phosphogluconolactonase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_4861_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(2876..3526)
DNA (651bp) protein (217aa)
ribose 5-phosphate isomerase (EC:5.3.1.6)
Ribose 5-phosphate isomerase Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJ99_NAKMY
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_4861_6
Alcanivorax sp. DG881, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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3553..3984
DNA (432bp) protein (144aa)
Pentapeptide repeat protein Tax=Alcanivorax sp. DG881 RepID=B4WZA5_9GAMM
Pentapeptide repeat protein {ECO:0000313|EMBL:EDX88945.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp. DG881.;"
low-complexity protein
PLM3-1_50_b1_sep16_scaffold_4861_7
unknown

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3981..4235
DNA (255bp) protein (85aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_4861_8
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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4309..5802
DNA (1494bp) protein (498aa)
CHAD domain containing protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0KY55_9ACTO
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3-1_50_b1_sep16_scaffold_4861_9
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

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5799..6197
DNA (399bp) protein (133aa)
hypothetical protein Tax=Streptomyces sp. AA0539 RepID=UPI000316FAEA
NUDIX hydrolase
Tax=RBG_16_Actinobacteria_68_21_curated
PLM3-1_50_b1_sep16_scaffold_4861_10
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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6305..6673
DNA (369bp) protein (123aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3-1_50_b1_sep16_scaffold_4861_11
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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6686..7672
DNA (987bp) protein (329aa)
Glucokinase Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CJB0_MYXFH
glucokinase
Glucokinase {ECO:0000313|EMBL:AEI62623.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
PLM3-1_50_b1_sep16_scaffold_4861_12
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7709..10027)
DNA (2319bp) protein (773aa)
Amylo-alpha-16-glucosidase Tax=Micromonospora sp. ATCC 39149 RepID=C4RPK6_9ACTO
Amylo-alpha-1,6-glucosidase {ECO:0000313|EMBL:EWS99873.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
amylo-alpha-16-glucosidase
PLM3-1_50_b1_sep16_scaffold_4861_13
Streptomyces sp. PCS3-D2, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(10323..11630)
DNA (1308bp) protein (436aa)
hypothetical protein Tax=Streptomyces sp. CNT302 RepID=UPI000361FB84
Uncharacterized protein {ECO:0000313|EMBL:EYU65650.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PCS3-D2.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_4861_14
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(11646..13280)
DNA (1635bp) protein (545aa)
Putative MFS transporter Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H672_ACTM4
putative MFS transporter
Putative MFS transporter {ECO:0000313|EMBL:BAL88509.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM3-1_50_b1_sep16_scaffold_4861_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

13367..13819
DNA (453bp) protein (151aa)
Uncharacterized protein Tax=Rhodococcus sp. EsD8 RepID=N1M872_9NOCA
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_4861_16
RBG_16_OP11_45_19_curated, Microgenomates, Bacteria

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13821..14111
DNA (291bp) protein (97aa)
Putative uncharacterized protein Tax=sediment metagenome RepID=D9PLA5_9ZZZZ
hypothetical protein
Tax=RBG_16_OP11_45_19_curated
PLM3-1_50_b1_sep16_scaffold_4861_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

14142..14537
DNA (396bp) protein (132aa)
membrane protein Tax=Amycolatopsis methanolica RepID=UPI00035CA069
integral membrane protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_4861_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(14616..15347)
DNA (732bp) protein (244aa)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI0003800821
glucose-methanol-choline oxidoreductase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_4861_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(15364..16125)
DNA (762bp) protein (254aa)
Choline dehydrogenase Tax=Streptomyces rimosus subsp. rimosus ATCC 10970 RepID=L8EMT6_STRRM
choline dehydrogenase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_4861_20
unknown

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16204..16485
DNA (282bp) protein (94aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_4861_21
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(16543..17238)
DNA (696bp) protein (232aa)
phosphoribosylformylglycinamidine synthase 1 (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064601}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064588};; Formylglycinamide ribonucleotide amidotransferase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; Glutaminase PurQ {ECO:0000256|HAMAP-Rule:MF_00421}; Phosphoribosylformylglycinamidine synthase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1).;"
phosphoribosylformylglycinamidine synthase Tax=Rhodopseudomonas sp. B29 RepID=UPI000344B720
PLM3-1_50_b1_sep16_scaffold_4861_22
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(17235..17465)
DNA (231bp) protein (77aa)
Phosphoribosylformylglycinamidine synthase, purS protein Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9R3A1_9RHOB
phosphoribosylformylglycinamidine synthase PurS
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_4861_23
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(17542..18327)
DNA (786bp) protein (262aa)
phosphoribosylaminoimidazolesuccinocarboxamide synthase; K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] bin=bin8_Chloro species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_4861_24
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(18324..19613)
DNA (1290bp) protein (430aa)
Adenylosuccinate lyase Tax=uncultured Acidobacteria bacterium RepID=H5SIT3_9BACT
adenylosuccinate lyase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_4861_25
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19829..21079)
DNA (1251bp) protein (417aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
Phosphoribosylamine--glycine ligase Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67KG4_SYMTH
phosphoribosylamine--glycine ligase
PLM3-1_50_b1_sep16_scaffold_4861_26
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

21142..21525
DNA (384bp) protein (128aa)
hypothetical protein bin=bin8_Chloro species=Dehalobacter sp. FTH1 genus=Dehalobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
Tax=CSP1_4_Chloroflexi
PLM3-1_50_b1_sep16_scaffold_4861_27
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(21544..22806)
DNA (1263bp) protein (421aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase Tax=Frankia sp. EUN1f RepID=D3D3U8_9ACTO
PLM3-1_50_b1_sep16_scaffold_4861_28
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(22834..23814)
DNA (981bp) protein (327aa)
Transporter, major facilitator subfamily protein Tax=Acanthamoeba castellanii str. Neff RepID=L8GF00_ACACA
major facilitator superfamily protein
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying 28 items

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