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PLM3-1_50_b1_sep16_scaffold_1398

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_1398_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(3..878)
DNA (876bp) protein (292aa)
3-isopropylmalate dehydratase, large subunit (EC:4.2.1.33 4.2.1.35)
3-isopropylmalate dehydratase large subunit Tax=Chthonomonas calidirosea T49 RepID=S0F054_9BACT
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3-1_50_b1_sep16_scaffold_1398_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(898..1476)
DNA (579bp) protein (193aa)
trpG; anthranilate synthase component II (EC:4.1.3.27)
Glutamine amidotransferase of anthranilate synthase bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1398_3
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(1473..2708)
DNA (1236bp) protein (412aa)
anthranilate synthase component I (EC:4.1.3.27)
Fragment of Anthranilate synthase Tax=Nitrolancetus hollandicus Lb RepID=I4EH65_9CHLR
Tax=CG_Dehalo_01
PLM3-1_50_b1_sep16_scaffold_1398_4
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2705..3730)
DNA (1026bp) protein (342aa)
Putative diaminopropionate ammonia-lyase Tax=Kineosphaera limosa NBRC 100340 RepID=K6WSE2_9MICO
Putative diaminopropionate ammonia-lyase {ECO:0000313|EMBL:GAB96766.1}; species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_1398_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3776..4216)
DNA (441bp) protein (147aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C989_SPHTD
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM3-1_50_b1_sep16_scaffold_1398_6
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4750..5040
DNA (291bp) protein (97aa)
Heat shock protein DnaJ domain protein Tax=Halothece sp. (strain PCC 7418) RepID=K9Y7P0_HALP7
heat shock protein DnaJ domain-containing protein
DnaJ-class molecular chaperone with C-terminal Zn finger domain {ECO:0000313|EMBL:AFZ50915.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis salina PCC 8305.;"
PLM3-1_50_b1_sep16_scaffold_1398_7
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5161..5991
DNA (831bp) protein (277aa)
Uncharacterized protein Tax=Rhodococcus sp. (strain RHA1) RepID=Q0S5I7_RHOSR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG97199.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus jostii (strain RHA1).;"
PLM3-1_50_b1_sep16_scaffold_1398_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

6491..7168
DNA (678bp) protein (226aa)
DivIVA domain Tax=Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814) RepID=D9TPQ6_THETC
DivIVA domain
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1398_9
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7146..7679)
DNA (534bp) protein (178aa)
hypothetical protein Tax=Nocardiopsis synnemataformans RepID=UPI00034A73BD
Deaminase-reductase domain-containing protein {ECO:0000313|EMBL:EON25473.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
bifunctional deaminase-reductase domain-containing protein
PLM3-1_50_b1_sep16_scaffold_1398_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7809..8189)
DNA (381bp) protein (127aa)
Uncharacterized protein Tax=Bradyrhizobium sp. S23321 RepID=I0G0L2_9BRAD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3-1_50_b1_sep16_scaffold_1398_11
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8283..9707
DNA (1425bp) protein (475aa)
Uncharacterized protein {ECO:0000313|EMBL:CCH78560.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_1398_12
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9830..10102
DNA (273bp) protein (91aa)
Uncharacterized protein {ECO:0000313|EMBL:CCH78560.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
PLM3-1_50_b1_sep16_scaffold_1398_13
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

10121..10924
DNA (804bp) protein (268aa)
Polyphosphate:AMP phosphotransferase Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PMD3_MEIRD
Polyphosphate:AMP phosphotransferase
Polyphosphate:AMP phosphotransferase {ECO:0000313|EMBL:AGK05310.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21); (Thermus ruber).;"
PLM3-1_50_b1_sep16_scaffold_1398_14
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10924..11199
DNA (276bp) protein (92aa)
Uncharacterized protein Tax=Frankia sp. (strain EuI1c) RepID=E3J5F0_FRASU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP81894.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM3-1_50_b1_sep16_scaffold_1398_15

Not on your lists

11221..11907
DNA (687bp) protein (229aa)
Uncharacterized protein {ECO:0000313|EMBL:KGA14893.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
PLM3-1_50_b1_sep16_scaffold_1398_16
unknown

Not on your lists

11945..12592
DNA (648bp) protein (216aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2PVT4_9ACTO
type 12 methyltransferase
PLM3-1_50_b1_sep16_scaffold_1398_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

12589..12984
DNA (396bp) protein (132aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1398_18
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(12991..13383)
DNA (393bp) protein (131aa)
Uncharacterized protein Tax=Synechocystis sp. PCC 7509 RepID=L8KNF3_9SYNC
Membrane protein {ECO:0000313|EMBL:KIF24156.1}; species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_1398_19
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13496..14650)
DNA (1155bp) protein (385aa)
Low temperature requirement protein A Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IG84_9EURY
Low temperature requirement protein A {ECO:0000313|EMBL:ELZ95795.1}; species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_1398_20
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(14647..14859)
DNA (213bp) protein (71aa)
Cupin 2 conserved barrel domain protein Tax=Cyanothece sp. (strain PCC 7822) RepID=E0U625_CYAP2
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ADN17134.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7822).;"
PLM3-1_50_b1_sep16_scaffold_1398_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(14987..16561)
DNA (1575bp) protein (525aa)
Uncharacterized protein Tax=uncultured bacterium A1Q1_fos_2107 RepID=L7VQ40_9BACT
oligoendopeptidase F
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1398_22
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16638..17912)
DNA (1275bp) protein (425aa)
Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AX76_RUBXD
acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase
Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:ABG04002.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3-1_50_b1_sep16_scaffold_1398_23
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

17921..19009
DNA (1089bp) protein (363aa)
hypothetical protein Tax=Streptomyces sp. CNS615 RepID=UPI000378339D
oxidoreductase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1398_24
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19094..19531
DNA (438bp) protein (146aa)
Putative secreted protein Tax=Streptomyces scabies (strain 87.22) RepID=C9Z7V5_STRSW
hypothetical protein
Putative secreted protein {ECO:0000313|EMBL:CBG75858.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabies (strain 87.22) (Streptomyces scabiei).;"
PLM3-1_50_b1_sep16_scaffold_1398_25
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

19588..20208
DNA (621bp) protein (207aa)
Putitive phosphate transport regulator Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBP2_CONWI
Putitive phosphate transport regulator
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1398_26
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

20372..20809
DNA (438bp) protein (146aa)
Putative low-affinity inorganic phosphate transporter Tax=Patulibacter medicamentivorans RepID=H0E858_9ACTN
phosphate transporter
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying 26 items

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