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PLM3-1_50_b1_sep16_scaffold_1584

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_1584_1
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(1..483)
DNA (483bp) protein (161aa)
DNA-binding response regulator TcrA Tax=Patulibacter medicamentivorans RepID=H0E3K5_9ACTN
DNA-binding response regulator TcrA {ECO:0000313|EMBL:EHN11756.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
two component transcriptional regulator
PLM3-1_50_b1_sep16_scaffold_1584_2
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

688..1638
DNA (951bp) protein (317aa)
ABC transporter Tax=Kribbella catacumbae RepID=UPI000371B84B
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADB32569.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM3-1_50_b1_sep16_scaffold_1584_3
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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1640..2461
DNA (822bp) protein (274aa)
ABC transporter Tax=Kribbella catacumbae RepID=UPI0003641A7A
ABC transporter
ABC-2 type transporter {ECO:0000313|EMBL:ADB32568.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM3-1_50_b1_sep16_scaffold_1584_4
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2458..2982
DNA (525bp) protein (175aa)
hypothetical protein Tax=Amycolatopsis balhimycina RepID=UPI0003798048
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB32567.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM3-1_50_b1_sep16_scaffold_1584_5
R_RIF_OP11_02_39_21, RIF-OP11-2, Microgenomates, Bacteria

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comp(2979..3176)
DNA (198bp) protein (66aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_02_39_21_curated
PLM3-1_50_b1_sep16_scaffold_1584_6
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3296..4036)
DNA (741bp) protein (247aa)
Alkaline phosphatase (EC:3.1.3.1)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI000382B79C
Alkaline phosphatase {ECO:0000313|EMBL:KJK42239.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
PLM3-1_50_b1_sep16_scaffold_1584_7
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

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comp(4297..5133)
DNA (837bp) protein (279aa)
Uncharacterized protein Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z588_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM65835.1}; species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_1584_8
unknown

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5561..6250
DNA (690bp) protein (230aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1584_9
Loktanella cinnabarina, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6260..7141)
DNA (882bp) protein (294aa)
Sulfotransferase Tax=Loktanella cinnabarina LL-001 RepID=U3AEW6_9RHOB
Sulfotransferase {ECO:0000313|EMBL:GAD56229.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella cinnabarina LL-001.;"
sulfotransferase family protein
PLM3-1_50_b1_sep16_scaffold_1584_10
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(7138..8688)
DNA (1551bp) protein (517aa)
polysaccharide biosynthesis protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin3_NC10 organism_group=NC10
polysaccharide biosynthesis protein
Tax=CSP1_5_NC10
PLM3-1_50_b1_sep16_scaffold_1584_11
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(8779..9612)
DNA (834bp) protein (278aa)
putative sulfotransferase protein (EC:2.8.2.-)
sulfotransferase bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin3_NC10 organism_group=NC10
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3-1_50_b1_sep16_scaffold_1584_12
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(9749..11044)
DNA (1296bp) protein (432aa)
O-antigen polymerase bin=bin3_NC10 species=Thiothrix nivea genus=Thiothrix taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
O-antigen polymerase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3-1_50_b1_sep16_scaffold_1584_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(11046..11909)
DNA (864bp) protein (288aa)
id=14429078 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3-1_50_b1_sep16_scaffold_1584_14
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(11955..13097)
DNA (1143bp) protein (381aa)
glycosyl transferase family protein (EC:2.4.1.-)
glycosyl transferase group 1 protein bin=bin3_NC10 species=Thermoanaerobacter ethanolicus genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
PLM3-1_50_b1_sep16_scaffold_1584_15
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(13144..13953)
DNA (810bp) protein (270aa)
Cell surface polysaccharide biosynthesis / chain length determinant protein Tax=Saccharopolyspora erythraea RepID=A4FEI6_SACEN
wzz; cell surface polysaccharide biosynthesis / chain length determinant protein
Tax=RBG_16_Actinobacteria_70_17_curated
PLM3-1_50_b1_sep16_scaffold_1584_16
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(14990..16474)
DNA (1485bp) protein (495aa)
hypothetical protein Tax=Methylobacter marinus RepID=UPI00035DDB10
Uncharacterized protein {ECO:0000313|EMBL:KHE94020.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candidatus Scalindua brodae.;"
cytoplasmic protein
PLM3-1_50_b1_sep16_scaffold_1584_17
unknown

Not on your lists

comp(16638..17423)
DNA (786bp) protein (262aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1584_18
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

comp(17420..18268)
DNA (849bp) protein (283aa)
group 1 glycosyl transferase bin=bin3_NC10 species=Methylobacter marinus genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
group 1 glycosyl transferase
Tax=RBG_16_KB1_OP1_55_9_curated
Displaying 18 items

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