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PLM3-1_50_b1_sep16_scaffold_2147

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_2147_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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2..1711
DNA (1710bp) protein (570aa)
hypothetical protein Tax=Methyloversatilis universalis RepID=UPI000374C9E8
diguanylate cyclase and metal dependent phosphohydrolase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_2147_2
unknown

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comp(1666..2385)
DNA (720bp) protein (240aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2147_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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2389..2772
DNA (384bp) protein (128aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_2147_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(2892..4106)
DNA (1215bp) protein (405aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F003_CONWI
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_2147_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

4330..4917
DNA (588bp) protein (196aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_2147_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(5127..6584)
DNA (1458bp) protein (486aa)
Histidine kinase Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B1F2_HERA2
histidine kinase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_2147_7

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comp(6664..7449)
DNA (786bp) protein (262aa)
Uncharacterized protein Tax=Shewanella loihica (strain ATCC BAA-1088 / PV-4) RepID=A3QAL5_SHELP
Marine sediment metagenome DNA, contig: S01H1_C00819 {ECO:0000313|EMBL:GAF82997.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_2147_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(7453..8370)
DNA (918bp) protein (306aa)
Type II secretion system protein Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L011_THERP
type II secretion system protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_2147_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(8372..10249)
DNA (1878bp) protein (626aa)
Type II secretion system protein Tax=Nocardioides sp. CF8 RepID=R7XVK4_9ACTO
type ii secretion system integral membrane subunit
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_2147_10
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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comp(10246..11592)
DNA (1347bp) protein (449aa)
CpaF Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L013_THERP
protein CpaF
CpaF {ECO:0000313|EMBL:ACM06288.1}; species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
PLM3-1_50_b1_sep16_scaffold_2147_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(11596..12807)
DNA (1212bp) protein (404aa)
Response regulator receiver protein Tax=Thermincola potens (strain JR) RepID=D5XCW6_THEPJ
response regulator receiver protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_2147_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(12822..13232)
DNA (411bp) protein (137aa)
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying 12 items

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