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PLM3-1_50_b1_sep16_scaffold_2449

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_2449_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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3..863
DNA (861bp) protein (287aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Flags: Precursor;; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
modification methylase HemK Tax=Patulibacter americanus RepID=UPI0003B55C9A
protein-(glutamine-N5) methyltransferase
PLM3-1_50_b1_sep16_scaffold_2449_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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948..1535
DNA (588bp) protein (196aa)
Release factor glutamine methyltransferase Tax=Patulibacter medicamentivorans RepID=H0E4G3_9ACTN
Hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_2449_3
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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1546..2844
DNA (1299bp) protein (433aa)
serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
serine hydroxymethyltransferase Tax=Patulibacter americanus RepID=UPI0003B59252
PLM3-1_50_b1_sep16_scaffold_2449_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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2856..3518
DNA (663bp) protein (221aa)
Uracil phosphoribosyltransferase Tax=Ruegeria sp. (strain TM1040) RepID=Q1GGB4_RUEST
upp; uracil phosphoribosyltransferase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_2449_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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3535..4662
DNA (1128bp) protein (376aa)
Glycosyl transferase, family 4, conserved region Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F946_CONWI
glycosyl transferase, family 4, conserved region
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_2449_6
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4659..5369)
DNA (711bp) protein (237aa)
UPI0003CE518E related cluster Tax=unknown RepID=UPI0003CE518E
Hydrolase {ECO:0000313|EMBL:ESW92736.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
alpha/beta hydrolase fold protein-1
PLM3-1_50_b1_sep16_scaffold_2449_7
unknown

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5461..5670
DNA (210bp) protein (70aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2449_8
unknown

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5667..6062
DNA (396bp) protein (132aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2449_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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6059..6946
DNA (888bp) protein (296aa)
ATP synthase subunit a Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F942_CONWI
ATP synthase F0 subunit alpha
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; Flags: Precursor;; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_2449_10
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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6962..7228
DNA (267bp) protein (89aa)
ATP synthase C chain Tax=Patulibacter medicamentivorans RepID=H0E4H3_9ACTN
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
ATP synthase F0 C subunit
PLM3-1_50_b1_sep16_scaffold_2449_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

7235..7765
DNA (531bp) protein (177aa)
ATP synthase subunit b Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F940_CONWI
ATP synthase F0 subunit B
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398, ECO:0000256|RuleBase:RU003849}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_2449_12
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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7929..8462
DNA (534bp) protein (178aa)
ATP synthase subunit delta Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8DZD5_9FIRM
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum hydrothermale Lam5 = DSM 18033.;"
F0F1 ATP synthase subunit delta
PLM3-1_50_b1_sep16_scaffold_2449_13
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

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8577..10106
DNA (1530bp) protein (510aa)
atpA; ATP synthase F0F1 subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha Tax=Acetonema longum DSM 6540 RepID=F7NIT9_9FIRM
Tax=RBG_16_Actinobacteria_64_13_curated
PLM3-1_50_b1_sep16_scaffold_2449_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

10126..11013
DNA (888bp) protein (296aa)
ATP synthase gamma chain Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F937_CONWI
ATP synthase F1 subunit gamma
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_2449_15
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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11092..12192
DNA (1101bp) protein (367aa)
ATPase associated with various cellular activities AAA_3 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G9X8_CHLAD
ATPase
ATPase associated with various cellular activities AAA_3 {ECO:0000313|EMBL:ACL24493.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans (strain MD-66 / DSM 9485).;"
PLM3-1_50_b1_sep16_scaffold_2449_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

12367..13290
DNA (924bp) protein (308aa)
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_2449_17
unknown

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13295..14092
DNA (798bp) protein (266aa)

This feature has no annotations

Displaying 17 items

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