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PLM3-1_50_b1_sep16_scaffold_91

Search features with annotation key words

Displaying items 31-54 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_91_30
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(29467..30252)
DNA (786bp) protein (262aa)
signal peptidase I (EC:3.4.21.89)
Signal peptidase I Tax=Thermincola potens (strain JR) RepID=D5X8L1_THEPJ
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_91_31
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(30398..31048)
DNA (651bp) protein (217aa)
tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
tRNA (guanine-N(1)-)-methyltransferase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1D3_CONWI
PLM3-1_50_b1_sep16_scaffold_91_32
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31067..31606)
DNA (540bp) protein (180aa)
16S rRNA-processing protein RimM Tax=Lachnospiraceae bacterium NK4A136 RepID=UPI0003B5A045
rimM; 16S rRNA-processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316); (Clostridium proteoclasticum).;"
PLM3-1_50_b1_sep16_scaffold_91_33
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31698..31928)
DNA (231bp) protein (77aa)
UPF0109 protein HMPREF9374_0880 Tax=Desmospora sp. 8437 RepID=F5SCP9_9BACL
ylqC; hypothetical protein
Tax=BJP_IG2157_Clostridiales_52_13
PLM3-1_50_b1_sep16_scaffold_91_34
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(31921..32166)
DNA (246bp) protein (82aa)
30S ribosomal protein S16 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SFP3_CLOSG
rpsP; 30S ribosomal protein S16
Tax=CG_Solirubrobact_01
PLM3-1_50_b1_sep16_scaffold_91_35
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


comp(32208..33443)
DNA (1236bp) protein (412aa)
Signal recognition particle protein Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GKL4_9FIRM
signal recognition particle protein Srp54
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_91_36
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

33558..35960
DNA (2403bp) protein (801aa)
Adenylate/guanylate cyclase bin=GWC2_Chloroflexi_73_18 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
LuxR family transcriptional regulator
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_91_37
unknown

Not on your lists

36290..36526
DNA (237bp) protein (79aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_91_38
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(36530..36751)
DNA (222bp) protein (74aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_91_39
unknown

Not on your lists

36901..37158
DNA (258bp) protein (86aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_91_40
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(37203..38150)
DNA (948bp) protein (316aa)
Signal recognition particle receptor FtsY Tax=Patulibacter medicamentivorans RepID=H0EBR4_9ACTN
signal recognition particle-docking protein FtsY
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_91_41
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(38251..40902)
DNA (2652bp) protein (884aa)
hypothetical protein Tax=Spirochaeta alkalica RepID=UPI0003647499
smc; chromosome segregation protein SMC
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_91_42
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(40979..41422)
DNA (444bp) protein (148aa)
ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1E3_CONWI
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_91_43
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(41611..41859)
DNA (249bp) protein (83aa)
acyl carrier protein
acyl carrier protein; K02078 acyl carrier protein bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_91_44
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41869..42873)
DNA (1005bp) protein (335aa)
hypothetical protein Tax=Desulfurispora thermophila RepID=UPI00037F09BD
phosphate:acyl-(acyl carrier protein) acyltransferase
Tax=RBG_16_Actinobacteria_64_13_curated
PLM3-1_50_b1_sep16_scaffold_91_45
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43240..44361
DNA (1122bp) protein (374aa)
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
PLM3-1_50_b1_sep16_scaffold_91_46
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

44508..45644
DNA (1137bp) protein (379aa)
YD repeat protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F4T5_CONWI
hypothetical protein
YD repeat protein {ECO:0000313|EMBL:ADB52542.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_91_47
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(45680..46225)
DNA (546bp) protein (182aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1E7_CONWI
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_91_48
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

46261..47199
DNA (939bp) protein (313aa)
Transcriptional regulator, LysR family Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYT5_CONWI
LysR family transcriptional regulator
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_91_49
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(47299..47811)
DNA (513bp) protein (171aa)
Archaeal/vacuolar-type H+-ATPase subunit H Tax=Patulibacter medicamentivorans RepID=H0E9S0_9ACTN
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_91_50
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(47824..48339)
DNA (516bp) protein (172aa)
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1F3_CONWI
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_91_51
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(48336..48869)
DNA (534bp) protein (178aa)
Methyltransferase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1F4_CONWI
methyltransferase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_91_52
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(48955..51039)
DNA (2085bp) protein (695aa)
DEAD/DEAH box helicase domain protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1F5_CONWI
DEAD/DEAH box helicase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_91_53
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(51160..51723)
DNA (564bp) protein (188aa)
Putative uncharacterized protein Tax=Micromonospora sp. ATCC 39149 RepID=C4RLB0_9ACTO
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR61528.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
Phosphoglycerate mutase
Displaying items 31-54 of 54 in total

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