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PLM3-1_50_b1_sep16_scaffold_406

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_406_1

Not on your lists

comp(3..1178)
DNA (1176bp) protein (392aa)
Resolvase, N-terminal domain Tax=Magnetococcus sp. (strain MC-1) RepID=A0LAX0_MAGSM
Uncharacterized protein {ECO:0000313|EMBL:KKK54971.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
resolvase domain-containing protein
PLM3-1_50_b1_sep16_scaffold_406_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

1235..1444
DNA (210bp) protein (70aa)
Ferritin family protein Tax=Amycolatopsis mediterranei RepID=D8I9L0_AMYMU
ferritin family protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_406_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

1614..2012
DNA (399bp) protein (133aa)
hypothetical protein Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI0003628C60
secondary thiamine-phosphate synthase enzyme
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_406_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

2016..2909
DNA (894bp) protein (298aa)
ABC transporter related protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F158_CONWI
ABC transporter
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_406_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

2906..3649
DNA (744bp) protein (248aa)
Uncharacterized protein Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A651_9MICO
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_406_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

3837..5201
DNA (1365bp) protein (455aa)
RNA methyltransferase, TrmA family Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAE6_CONWI
RNA methyltransferase, TrmA family
RNA methyltransferase, TrmA family {ECO:0000313|EMBL:ADB49215.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_406_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(5217..5963)
DNA (747bp) protein (249aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_406_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(6126..6719)
DNA (594bp) protein (198aa)
Uracil-DNA glycosylase-like protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAF2_CONWI
uracil-DNA glycosylase-like protein
Uracil-DNA glycosylase-like protein {ECO:0000313|EMBL:ADB49221.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_406_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6742..8475)
DNA (1734bp) protein (578aa)
PHP domain protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAF3_CONWI
PHP domain-containing protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_406_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

8536..8772
DNA (237bp) protein (79aa)
Zinc finger CDGSH-type domain protein Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SYN4_PLAL2
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_406_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8744..9466)
DNA (723bp) protein (241aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_406_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(9463..10902)
DNA (1440bp) protein (480aa)
Myo-inositol-1-phosphate synthase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4I3_SPHTD
Myo-inositol-1-phosphate synthase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_406_13
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11128..11742)
DNA (615bp) protein (205aa)
tropinesterase (EC:3.1.1.10)
Alpha/beta hydrolase fold protein Tax=alpha proteobacterium BAL199 RepID=A8TSY8_9PROT
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EDP64385.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
PLM3-1_50_b1_sep16_scaffold_406_14
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(11752..12429)
DNA (678bp) protein (226aa)
CDP-alcohol phosphatidyltransferase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAF5_CONWI
CDP-alcohol phosphatidyltransferase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_406_15
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(12552..13406)
DNA (855bp) protein (285aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAF6_CONWI
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_406_16
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

13481..14434
DNA (954bp) protein (318aa)
Permease of the drug or metabolite transporter (DMT) superfamily bin=bin8_Chloro species=Micromonospora lupini genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_406_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14458..15459)
DNA (1002bp) protein (334aa)
moaA; molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein bin=bin3_NC10 species=Methyloversatilis universalis genus=Methyloversatilis taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
moaA; molybdenum cofactor biosynthesis protein A
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3-1_50_b1_sep16_scaffold_406_18
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

15486..16364
DNA (879bp) protein (293aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI0003632E32
EamA-like transporter family
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_406_19
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

16368..17213
DNA (846bp) protein (282aa)
Uncharacterized protein Tax=Natronococcus jeotgali DSM 18795 RepID=L9XSU9_9EURY
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_406_20
Streptomycetaceae bacterium MP113-05, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17210..17638)
DNA (429bp) protein (143aa)
Uncharacterized protein Tax=Streptomycetaceae bacterium MP113-05 RepID=V6K6T4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EST27131.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae.;" source="Streptomycetaceae bacterium MP113-05.;"
Ion transport 2 domain-containing protein
PLM3-1_50_b1_sep16_scaffold_406_21
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

17742..19667
DNA (1926bp) protein (642aa)
Chaperone protein DnaK Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAG2_CONWI
chaperone protein DnaK
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_406_22
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

19664..20242
DNA (579bp) protein (193aa)
Protein GrpE Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=GRPE_RUBXD
GrpE protein HSP-70 cofactor
Protein GrpE {ECO:0000255|HAMAP-Rule:MF_01151}; HSP-70 cofactor {ECO:0000255|HAMAP-Rule:MF_01151}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3-1_50_b1_sep16_scaffold_406_23
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

20289..21380
DNA (1092bp) protein (364aa)
Chaperone protein DnaJ Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXX4_RUBXD
chaperone DnaJ
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3-1_50_b1_sep16_scaffold_406_24
unknown

Not on your lists

21377..21571
DNA (195bp) protein (65aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_406_25
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

21571..21936
DNA (366bp) protein (122aa)
Transcriptional regulator, MerR family Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXX3_RUBXD
MerR family transcriptional regulator
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_406_26
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

21938..24418
DNA (2481bp) protein (827aa)
ATPase AAA-2 domain protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02BQ1_SOLUE
ATPase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_406_27
unknown

Not on your lists

comp(24482..24856)
DNA (375bp) protein (125aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_406_28
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

24923..27760
DNA (2838bp) protein (946aa)
Regulatory protein, LuxR Tax=Mycobacterium RepID=A1UAD6_MYCSK
regulatory protein LuxR
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_406_29
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

27812..28300
DNA (489bp) protein (163aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_406_30
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

28381..28824
DNA (444bp) protein (148aa)
Uncharacterized protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CA88_SPHTD
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying items 1-30 of 33 in total

View Taxonomy