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PLM3-1_50_b1_sep16_scaffold_482

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Displaying items 31-44 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_482_31
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


18711..18938
DNA (228bp) protein (76aa)
30S ribosomal protein S4 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=RS4_RUBXD
30S ribosomal protein S4
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_482_32
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

19004..19954
DNA (951bp) protein (317aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
DNA-directed RNA polymerase subunit alpha Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYS1_CONWI
DNA-directed RNA polymerase subunit alpha
PLM3-1_50_b1_sep16_scaffold_482_33
GWC2_SYX_53_9_curated, Bacteria

Not on your lists


19959..20381
DNA (423bp) protein (141aa)
50S ribosomal protein L17 Tax=Nocardiopsis lucentensis RepID=UPI00034AD48D
50S ribosomal protein L17
Tax=GWC2_SYX_53_9_curated
PLM3-1_50_b1_sep16_scaffold_482_34
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

20484..20804
DNA (321bp) protein (107aa)
Uncharacterized protein Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LLD4_THEBM
Hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_482_35
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

21092..22528
DNA (1437bp) protein (479aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00037DCD27
Kelch repeat-containing protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
PLM3-1_50_b1_sep16_scaffold_482_36
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

22811..23188
DNA (378bp) protein (126aa)
tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
tRNA pseudouridine synthase A Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYS3_CONWI
PLM3-1_50_b1_sep16_scaffold_482_37
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

23232..23870
DNA (639bp) protein (213aa)
HAD-superfamily hydrolase subfamily IA, variant 3 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATN9_RUBXD
HAD family hydrolase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_482_38
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

23860..25833
DNA (1974bp) protein (658aa)
DNA ligase Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=DNLJ_ROSCS
dnlj: DNA ligase, NAD-dependent
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_482_39
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(25854..27062)
DNA (1209bp) protein (403aa)
dac; putative D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase Tax=Frankia sp. (strain CcI3) RepID=Q2J4Y5_FRASC
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_482_40
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(27400..27711)
DNA (312bp) protein (104aa)
Uncharacterized protein Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0IHZ1_THETR
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_482_41
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

27890..29065
DNA (1176bp) protein (392aa)
Uncharacterized protein Tax=Bacillus bataviensis LMG 21833 RepID=K6EE21_9BACI
nlp/P60 family protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_482_42
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29079..30914)
DNA (1836bp) protein (612aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
AMP-dependent synthetase and ligase
Tax=CSP1_8_Deltaproteobacteria
PLM3-1_50_b1_sep16_scaffold_482_43
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

31177..32046
DNA (870bp) protein (290aa)
Probable DNA repair protein J416_02589 Tax=Gracilibacillus halophilus YIM-C55.5 RepID=N4WFF7_9BACI
Ku protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_482_44
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(32056..32235)
DNA (180bp) protein (60aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYU4_CONWI
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
Displaying items 31-44 of 44 in total

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