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PLM3-1_50_b1_sep16_scaffold_482

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_482_1
Hydrogenivirga sp. 128-5-R1-1, Hydrogenivirga, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists


2..175
DNA (174bp) protein (58aa)
30S ribosomal protein S12 (Fragment) Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V5B0_9AQUI
30S ribosomal protein S12 {ECO:0000256|RuleBase:RU003623}; Flags: Fragment;; species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenivirga.;" source="Hydrogenivirga sp. 128-5-R1-1.;"
ribosomal protein S12
PLM3-1_50_b1_sep16_scaffold_482_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

595..2694
DNA (2100bp) protein (700aa)
Elongation factor G Tax=Moorella thermoacetica (strain ATCC 39073) RepID=EFG_MOOTA
fusA; elongation factor G
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_482_3
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2730..3920
DNA (1191bp) protein (397aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=EFTU_ACIC1
Elongation factor Tu {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-Tu {ECO:0000255|HAMAP-Rule:MF_00118};; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM3-1_50_b1_sep16_scaffold_482_4
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


3954..4262
DNA (309bp) protein (103aa)
30S ribosomal protein S10 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEU4_CONWI
30S ribosomal protein S10
Tax=RBG_16_Actinobacteria_64_13_curated
PLM3-1_50_b1_sep16_scaffold_482_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


4372..4986
DNA (615bp) protein (205aa)
50S ribosomal protein L3 Tax=Patulibacter medicamentivorans RepID=H0E8P0_9ACTN
50S ribosomal protein L3
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_482_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


4986..5627
DNA (642bp) protein (214aa)
50S ribosomal protein L4 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEU6_CONWI
50S ribosomal protein L4
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_482_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


5624..5920
DNA (297bp) protein (99aa)
50S ribosomal protein L23 Tax=Patulibacter medicamentivorans RepID=H0E8P2_9ACTN
ribosomal protein L25/L23
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_482_8
Coriobacteriaceae bacterium 68-1-3, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


5920..6765
DNA (846bp) protein (282aa)
50S ribosomal protein L2 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6E9U3_9ACTN
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae.;" source="Coriobacteriaceae bacterium 68-1-3.;"
PLM3-1_50_b1_sep16_scaffold_482_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


6974..7213
DNA (240bp) protein (80aa)
30S ribosomal protein S19 Tax=Clostridium sp. CAG:245 RepID=R6B2A4_9CLOT
30S ribosomal protein S19
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_482_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


7213..7680
DNA (468bp) protein (156aa)
50S ribosomal protein L22 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEV0_CONWI
50S ribosomal protein L22
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_482_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


7847..8812
DNA (966bp) protein (322aa)
30S ribosomal protein S3 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEV1_CONWI
30S ribosomal protein S3
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_482_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


8812..9237
DNA (426bp) protein (142aa)
50S ribosomal protein L16 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEV2_CONWI
50S ribosomal protein L16
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_482_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


9227..9433
DNA (207bp) protein (69aa)
50S ribosomal protein L29 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SKZ2_THEM7
50S ribosomal protein L29
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_482_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


9426..10142
DNA (717bp) protein (239aa)
30S ribosomal protein S17 Tax=Patulibacter medicamentivorans RepID=H0E8P9_9ACTN
30S ribosomal protein S17
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_482_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


10139..10507
DNA (369bp) protein (123aa)
50S ribosomal protein L14 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEV5_CONWI
50S ribosomal protein L14
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_482_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


10508..10879
DNA (372bp) protein (124aa)
50S ribosomal protein L24 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=RL24_CARHZ
rplX; 50S ribosomal protein L24
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_482_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


10876..11457
DNA (582bp) protein (194aa)
50S ribosomal protein L5 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEV7_CONWI
50S ribosomal protein L5
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_482_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


11463..11648
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=RS14Z_ACIC1
rpsN; 30S ribosomal protein S14
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_482_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


11659..12075
DNA (417bp) protein (139aa)
30S ribosomal protein S8 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQM5_9FIRM
30S ribosomal protein S8
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_482_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


12098..12631
DNA (534bp) protein (178aa)
50S ribosomal protein L6 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEW0_CONWI
50S ribosomal protein L6
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_482_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


12762..13115
DNA (354bp) protein (118aa)
50S ribosomal protein L18 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEW1_CONWI
50S ribosomal protein L18
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_482_22
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


13112..13711
DNA (600bp) protein (200aa)
30S ribosomal protein S5 Tax=Patulibacter medicamentivorans RepID=H0E8Q7_9ACTN
30S ribosomal protein S5
Tax=RBG_16_Actinobacteria_64_13_curated
PLM3-1_50_b1_sep16_scaffold_482_23
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


13708..13887
DNA (180bp) protein (60aa)
50S ribosomal protein L30 Tax=Butyricimonas synergistica RepID=UPI00037C25B5
ribosomal protein L30
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_482_24
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


13895..14518
DNA (624bp) protein (208aa)
50S ribosomal protein L15 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYR4_CONWI
50S ribosomal protein L15
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_482_25
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists


14521..15774
DNA (1254bp) protein (418aa)
Protein translocase subunit SecY Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYR5_CONWI
preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_482_26
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

15788..16357
DNA (570bp) protein (190aa)
adenylate kinase (EC:2.7.4.3)
Adenylate kinase Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S1E1_DESTD
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_482_27
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

16354..17130
DNA (777bp) protein (259aa)
hypothetical protein Tax=Orenia marismortui RepID=UPI000379BEE2
methionine aminopeptidase, type I
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_482_28
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

17287..17508
DNA (222bp) protein (74aa)
translation initiation factor IF-1 Tax=Omnitrophica bacterium SCGC AAA257-O07 RepID=UPI0003B2ED31
translation initiation factor IF-1
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_482_29
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


17638..18018
DNA (381bp) protein (127aa)
30S ribosomal protein S13 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WS72_KYRT2
30S ribosomal protein S13
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_482_30
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


18018..18422
DNA (405bp) protein (135aa)
30S ribosomal protein S11 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYS0_CONWI
30S ribosomal protein S11
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying items 1-30 of 44 in total

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