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PLM3-1_50_b1_sep16_scaffold_840

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_840_1
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..710)
DNA (708bp) protein (236aa)
ribonucleoside-diphosphate reductase (EC:1.17.4.1)
Ribonucleotide reductase of class II (Coenzyme B12-dependent) bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_50_b1_sep16_scaffold_840_2
unknown

Not on your lists

comp(903..1517)
DNA (615bp) protein (205aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_840_3
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

1671..3632
DNA (1962bp) protein (654aa)
O-antigen polymerase Tax=Patulibacter medicamentivorans RepID=H0EC06_9ACTN
O-antigen polymerase {ECO:0000313|EMBL:EHN08789.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
O-antigen polymerase
PLM3-1_50_b1_sep16_scaffold_840_4
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(3627..4040)
DNA (414bp) protein (138aa)
Uncharacterized protein Tax=Patulibacter medicamentivorans RepID=H0E766_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN10483.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
cupin
PLM3-1_50_b1_sep16_scaffold_840_5
unknown

Not on your lists

comp(4064..4198)
DNA (135bp) protein (45aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_840_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(4554..5468)
DNA (915bp) protein (305aa)
NAD-dependent epimerase/dehydratase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARF8_RUBXD
NAD-dependent epimerase/dehydratase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_840_7
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5502..6098
DNA (597bp) protein (199aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6S9E1_INTC7
PLM3-1_50_b1_sep16_scaffold_840_8
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

6073..7161
DNA (1089bp) protein (363aa)
DNA polymerase III, delta prime subunit Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZI3_CONWI
DNA polymerase III delta prime subunit
Tax=RBG_16_Actinobacteria_64_13_curated
PLM3-1_50_b1_sep16_scaffold_840_trna_1
unknown

Not on your lists

7186..7258
DNA (73bp)
transferRNA Thr
PLM3-1_50_b1_sep16_scaffold_840_9
unknown

Not on your lists

comp(7435..7683)
DNA (249bp) protein (83aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_840_10
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8604..8912)
DNA (309bp) protein (103aa)
Putative metal dependent phosphohydrolase Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LC89_ACEWD
putative metal dependent phosphohydrolase
Putative metal dependent phosphohydrolase {ECO:0000313|EMBL:AFA50204.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
PLM3-1_50_b1_sep16_scaffold_840_11
Streptomyces venezuelae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9354..9800
DNA (447bp) protein (149aa)
Uncharacterized protein Tax=Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) RepID=F2RKM1_STRVP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA60377.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 /; JCM 4526 / NBRC 13096 / PD 04745).;"
PLM3-1_50_b1_sep16_scaffold_840_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

10015..11013
DNA (999bp) protein (333aa)
Basic membrane lipoprotein Tax=Thermoanaerobacter RepID=B0KCB5_THEP3
basic membrane lipoprotein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_840_13
Mycobacterium sp. VKM Ac-1817D, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11006..13297)
DNA (2292bp) protein (764aa)
hypothetical protein Tax=Mycobacterium sp. 360MFTsu5.1 RepID=UPI000376672B
Uncharacterized protein {ECO:0000313|EMBL:AJR29946.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. VKM Ac-1817D.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_840_14
unknown

Not on your lists

13413..14027
DNA (615bp) protein (205aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_840_15
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14171..15490
DNA (1320bp) protein (440aa)
amidohydrolase Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002627602
aminopeptidase Y
Aminopeptidase Y {ECO:0000313|EMBL:AIJ20349.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM3-1_50_b1_sep16_scaffold_840_16
unknown

Not on your lists

comp(15537..15980)
DNA (444bp) protein (148aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_840_17
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16080..16376)
DNA (297bp) protein (99aa)
Putative uncharacterized protein Tax=Sphingobium sp. SYK-6 RepID=G2IKZ4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ETK36313.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_840_18
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

16444..17511
DNA (1068bp) protein (356aa)
ErfK/YbiS/YcfS/YnhG family protein Tax=Isoptericola variabilis (strain 225) RepID=F6FVT7_ISOV2
ErfK/YbiS/YcfS/YnhG family protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_840_19
unknown

Not on your lists

17758..18051
DNA (294bp) protein (98aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_840_20
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

18130..18735
DNA (606bp) protein (202aa)
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_840_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

18735..19283
DNA (549bp) protein (183aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_840_22
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

19473..20615
DNA (1143bp) protein (381aa)
tdh; l-threonine 3-dehydrogenase (EC:1.1.1.103)
L-threonine 3-dehydrogenase Tax=Candidatus Nitrospira defluvii RepID=D8P8L9_9BACT
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_840_23
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

20612..21787
DNA (1176bp) protein (392aa)
kbl; putative 2-amino-3-ketobutyrate coenzyme A ligase (EC:2.3.1.29)
Putative 2-amino-3-ketobutyrate coenzyme A ligase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A638_GEMAT
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_840_24
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(21828..22256)
DNA (429bp) protein (143aa)
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_840_25
unknown

Not on your lists

22366..22671
DNA (306bp) protein (102aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_840_26
unknown

Not on your lists

22655..23224
DNA (570bp) protein (190aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_840_27
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

23221..24531
DNA (1311bp) protein (437aa)
Copper resistance protein CopC Tax=Roseiflexus sp. (strain RS-1) RepID=A5UTE2_ROSS1
copper resistance protein CopC
Copper resistance protein CopC {ECO:0000313|EMBL:ABQ89895.1}; Flags: Precursor;; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
PLM3-1_50_b1_sep16_scaffold_840_28
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

24573..25472
DNA (900bp) protein (300aa)
Cation diffusion facilitator family transporter Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYG3_RUBXD
cation diffusion facilitator family transporter
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_840_29
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(25519..26484)
DNA (966bp) protein (322aa)
NAD-dependent alcohol dehydrogenase Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYN5_THERP
NAD-dependent alcohol dehydrogenase
NAD-dependent alcohol dehydrogenase {ECO:0000313|EMBL:ACM05307.1}; species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
Displaying items 1-30 of 49 in total

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