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PLM3-1_50_b1_sep16_scaffold_1800

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_1800_1
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(1..675)
DNA (675bp) protein (225aa)
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_1800_2
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(739..1749)
DNA (1011bp) protein (337aa)
Helix-turn-helix type 11 domain protein bin=GWC2_Chloroflexi_73_18 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Helix-turn-helix type 11 domain-containing protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_1800_3
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(1746..3020)
DNA (1275bp) protein (425aa)
id=14629744 bin=bin8_Chloro tax=bin8_Chloro organism_group=Chloroflexi
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_1800_4
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

3292..3495
DNA (204bp) protein (68aa)
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_1800_5
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

3641..4465
DNA (825bp) protein (275aa)
hypothetical protein; K09134 hypothetical protein bin=bin8_Chloro species=Actinomadura madurae genus=Actinomadura taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_1800_6

Not on your lists

comp(4744..5232)
DNA (489bp) protein (163aa)
Secreted protein (Fragment) Tax=sediment metagenome RepID=D9PKY7_9ZZZZ
Secreted protein {ECO:0000313|EMBL:EFK95778.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
lysM domain protein
PLM3-1_50_b1_sep16_scaffold_1800_7
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(5265..8180)
DNA (2916bp) protein (972aa)
hypothetical protein bin=bin8_Chloro species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=bin8_Chloro organism_group=Chloroflexi
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_1800_8
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(8295..9194)
DNA (900bp) protein (300aa)
Putative uncharacterized protein (Fragment) bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_1800_9
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(9414..10001)
DNA (588bp) protein (196aa)
id=14629734 bin=bin8_Chloro tax=bin8_Chloro organism_group=Chloroflexi
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_1800_10
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(9998..10549)
DNA (552bp) protein (184aa)
hypothetical protein bin=bin8_Chloro species=Desulfovibrio alkalitolerans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_1800_11
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

10600..11280
DNA (681bp) protein (227aa)
thiamine pyrophosphokinase; K00949 thiamine pyrophosphokinase [EC:2.7.6.2] bin=bin8_Chloro species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
thiamine pyrophosphokinase
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_1800_12
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

11283..11765
DNA (483bp) protein (161aa)
peroxiredoxin (EC:1.11.1.15); K03564 peroxiredoxin Q/BCP [EC:1.11.1.15] bin=bin8_Chloro species=Thermus islandicus genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin8_Chloro organism_group=Chloroflexi
alkyl hydroperoxide reductase
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_1800_13
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

11812..12642
DNA (831bp) protein (277aa)
GlcNAc-PI de-N-acetylase family bin=bin8_Chloro species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
putative deacetylase
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_1800_14
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(12661..14523)
DNA (1863bp) protein (621aa)
hypothetical protein bin=bin8_Chloro species=Volvox carteri genus=Volvox taxon_order=Chlamydomonadales taxon_class=Chlorophyceae phylum=Chlorophyta tax=bin8_Chloro organism_group=Chloroflexi
baaA1; trimeric autotransporter adhesin
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_1800_15
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

14781..15902
DNA (1122bp) protein (374aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase bin=GWC2_Chloroflexi_73_18 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
NADPH-dependent glutamate synthase beta chain-like oxidoreductase
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_1800_16
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

15980..16654
DNA (675bp) protein (225aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase bin=GWC2_Chloroflexi_73_18 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_1800_17
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

16651..17115
DNA (465bp) protein (155aa)
Cytochrome bc1 complex, cytochrome b6 subunit bin=GWC2_Chloroflexi_73_18 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
putative menaquinol-cytochrome c reductase cytochrome b subunit
Tax=RBG_16_RIF_CHLX_70_13_curated
Displaying 17 items

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