ggKbase home page

PLM3-1_50_b1_sep16_scaffold_2496

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_2496_1
unknown

Not on your lists

comp(2..331)
DNA (330bp) protein (110aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2496_2
Gordonia sputi, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

417..1925
DNA (1509bp) protein (503aa)
Putative mannosyltransferase Tax=Gordonia sputi NBRC 100414 RepID=H5U015_9ACTO
Putative mannosyltransferase {ECO:0000313|EMBL:GAB39073.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sputi NBRC 100414.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_2496_3
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

2024..2752
DNA (729bp) protein (243aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA300-K03 RepID=UPI0003604C2C
cell wall biosynthesis glycosyltransferase
Tax=BJP_IG2158_Zixibacteria_48_33
PLM3-1_50_b1_sep16_scaffold_2496_4
RBG_13_Chloroflexi_48_10_curated, Chloroflexi, Bacteria

Not on your lists

2749..3750
DNA (1002bp) protein (334aa)
hypothetical protein Tax=Coprothermobacter platensis RepID=UPI00035CAB17
dTDP-glucose 4,6-dehydratase
Tax=RBG_13_Chloroflexi_48_10_curated
PLM3-1_50_b1_sep16_scaffold_2496_5
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(3743..4102)
DNA (360bp) protein (120aa)
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_2496_6
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(4900..5256)
DNA (357bp) protein (119aa)
LmbE family protein bin=GWC2_Chloroflexi_73_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_2496_7
unknown

Not on your lists

5261..5506
DNA (246bp) protein (82aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2496_8
unknown

Not on your lists

5445..6143
DNA (699bp) protein (233aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2496_9
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(5996..6679)
DNA (684bp) protein (228aa)
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase bin=GWC2_Chloroflexi_73_18 species=Methanolinea tarda genus=Methanolinea taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_2496_10
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(6718..7320)
DNA (603bp) protein (201aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
peptidoglycan-binding domain 1 protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_2496_11
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(7392..9431)
DNA (2040bp) protein (680aa)
Putative membrane transport protein bin=GWC2_Chloroflexi_73_18 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
major facilitator superfamily protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_2496_12
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(9465..10865)
DNA (1401bp) protein (467aa)
metal dependent phosphohydrolase bin=bin8_Chloro species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin8_Chloro organism_group=Chloroflexi
metal dependent phosphohydrolase
Tax=CSP1_4_Chloroflexi
PLM3-1_50_b1_sep16_scaffold_2496_13
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(11298..13406)
DNA (2109bp) protein (703aa)
transcriptional activator domain-containing protein bin=bin8_Chloro species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
transcriptional activator domain-containing protein
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_2496_14
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(13499..14719)
DNA (1221bp) protein (407aa)
ATP-dependent transcriptional regulator, MalT-like, LuxR family bin=GWC2_Chloroflexi_73_18 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
regulatory protein LuxR
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_2496_15
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(14795..14998)
DNA (204bp) protein (68aa)
hypothetical protein bin=bin8_Chloro species=Thermoanaerobacterium saccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_2496_16
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(15102..15407)
DNA (306bp) protein (102aa)
hypothetical protein bin=bin8_Chloro species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_2496_17
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

15865..16632
DNA (768bp) protein (256aa)
putative lipoprotein bin=bin8_Chloro species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_2496_18
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(16757..18106)
DNA (1350bp) protein (450aa)
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12] bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
replicative DNA helicase
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_2496_19
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(18404..18901)
DNA (498bp) protein (166aa)
lexA; LexA repressor; K01356 repressor LexA [EC:3.4.21.88] bin=bin8_Chloro species=unknown genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
lexA; LexA repressor (EC:3.4.21.88)
Tax=RBG_16_RIF_CHLX_69_14_curated
Displaying 19 items

View Taxonomy