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PLM3-1_50_b1_sep16_scaffold_567

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_567_1
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(2..916)
DNA (915bp) protein (305aa)
Uncharacterized protein bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
virulence factor MVIN family protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_567_2
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(1010..2512)
DNA (1503bp) protein (501aa)
recombination factor protein RarA; K07478 putative ATPase bin=bin8_Chloro species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
AAA ATPase
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_567_3
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2718..3236
DNA (519bp) protein (173aa)
Uncharacterized protein {ECO:0000313|EMBL:KJK12286.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_567_4
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(3299..3694)
DNA (396bp) protein (132aa)
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_567_5
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

3828..4358
DNA (531bp) protein (177aa)
hypothetical protein bin=bin8_Chloro species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_567_6
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

4396..7629
DNA (3234bp) protein (1078aa)
Uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_567_7
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

7674..8048
DNA (375bp) protein (125aa)
id=14630197 bin=bin8_Chloro tax=bin8_Chloro organism_group=Chloroflexi
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_567_8
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

8119..9321
DNA (1203bp) protein (401aa)
amidohydrolase bin=bin8_Chloro species=Thermoanaerobacter mathranii genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
Pm20d; peptidase M20 domain-containing protein 2 (Aminoacylase 1-like protein 2)
Tax=CSP1_4_Chloroflexi
PLM3-1_50_b1_sep16_scaffold_567_9
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

9470..10528
DNA (1059bp) protein (353aa)
Agmatinase bin=GWC2_Chloroflexi_73_18 species=Frankia sp. EUN1f genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
putative agmatinase
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_567_10
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

10525..11334
DNA (810bp) protein (270aa)
hypothetical protein bin=bin8_Chloro species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
putative S-adenosylmethionine (SAM)-dependent methyltransferase
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_567_11
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

11413..12570
DNA (1158bp) protein (386aa)
Response regulator receiver protein bin=GWC2_Chloroflexi_73_18 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
response regulator receiver protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_567_12
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

12581..13462
DNA (882bp) protein (294aa)
glutamate racemase (EC:5.1.1.3); K01776 glutamate racemase [EC:5.1.1.3] bin=bin8_Chloro species=Ornithinimicrobium pekingense genus=Ornithinimicrobium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
murI; Glutamate racemase (EC:5.1.1.3)
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_567_13
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

13459..14673
DNA (1215bp) protein (405aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_567_14
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

14670..15734
DNA (1065bp) protein (355aa)
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase bin=bin8_Chloro species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
D-isomer specific 2-hydroxyacid dehydrogenase
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_567_15
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

15737..16840
DNA (1104bp) protein (368aa)
GTP-binding protein YchF; K06942 bin=bin8_Chloro species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
GTP-dependent nucleic acid-binding protein EngD
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_567_16
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

17194..18162
DNA (969bp) protein (323aa)
id=14630187 bin=bin8_Chloro tax=bin8_Chloro organism_group=Chloroflexi
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_567_17
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(18169..19179)
DNA (1011bp) protein (337aa)
rbsR; ribose operon transcriptional repressor; K02529 LacI family transcriptional regulator bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
LacI family transcriptional regulator
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3-1_50_b1_sep16_scaffold_567_18
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(19217..20107)
DNA (891bp) protein (297aa)
monosaccharide-transporting ATPase (EC:3.6.3.17); K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17] bin=bin8_Chloro species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin8_Chloro organism_group=Chloroflexi
monosaccharide-transporting ATPase (EC:3.6.3.17)
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_567_19
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(20110..21045)
DNA (936bp) protein (312aa)
inner-membrane translocator; K02057 simple sugar transport system permease protein bin=bin8_Chloro species=Truepera radiovictrix genus=Truepera taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin8_Chloro organism_group=Chloroflexi
ABC transporter permease
Tax=RBG_16_RIF_CHLX_69_14_curated
Displaying 19 items

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