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PLM3-1_50_b1_sep16_scaffold_704

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Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_704_1
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(2..859)
DNA (858bp) protein (286aa)
NADH dehydrogenase (EC:1.6.99.5); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] bin=bin8_Chloro species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
NADH dehydrogenase I subunit F (EC:1.6.5.3)
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_704_2
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(862..1539)
DNA (678bp) protein (226aa)
Putative formate dehydrogenase, gamma subunit bin=GWC2_Chloroflexi_73_18 species=Pseudomonas entomophila genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
NADH-quinone oxidoreductase subunit I
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_704_3
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(1536..2882)
DNA (1347bp) protein (449aa)
respiratory-chain NADH dehydrogenase, subunit 1 bin=bin8_Chloro tax=bin8_Chloro organism_group=Chloroflexi
respiratory-chain NADH dehydrogenase subunit 1
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_704_4
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(3031..4302)
DNA (1272bp) protein (424aa)
NADH dehydrogenase I subunit D (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit D bin=GWC2_Chloroflexi_73_18 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_704_5
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(4337..4885)
DNA (549bp) protein (183aa)
NADH (or F420H2) dehydrogenase subunit C; K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] bin=bin8_Chloro species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
NADH-quinone oxidoreductase subunit C
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_704_6
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(4887..5642)
DNA (756bp) protein (252aa)
NADH-quinone oxidoreductase chain b 2 (EC:1.6.99.5); K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] bin=bin8_Chloro species=Anaeromusa acidaminophila genus=Anaeromusa taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
NAD(P)H-quinone oxidoreductase subunit K (EC:1.6.99.5)
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_704_7
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(5633..5989)
DNA (357bp) protein (119aa)
nuoA; proton-translocating NADH-ubiquinone oxidoreductase subunit a; K00330 NADH-quinone oxidoreductase subunit A [EC:1.6.5.3] bin=bin8_Chloro species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
NAD(P)H-quinone oxidoreductase subunit 3
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_704_8
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(6329..7549)
DNA (1221bp) protein (407aa)
hypothetical protein bin=bin8_Chloro species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_704_9
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(7559..8617)
DNA (1059bp) protein (353aa)
Hypothetical conserved protein bin=GWC2_Chloroflexi_73_18 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_704_10
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(8614..9351)
DNA (738bp) protein (246aa)
hypothetical protein bin=bin8_Chloro species=Bacillus amyloliquefaciens genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
pepE; peptidase S51 dipeptidase E
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_704_11
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

9390..10031
DNA (642bp) protein (214aa)
folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3); K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] bin=bin8_Chloro species=Stenotrophomonas sp. SKA14 genus=Stenotrophomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_704_12
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(10023..11039)
DNA (1017bp) protein (339aa)
Luciferase-like monooxygenase Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDA2_THET1
luciferase-like monooxygenase
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_704_13
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11051..12328)
DNA (1278bp) protein (426aa)
Kynureninase {ECO:0000255|HAMAP-Rule:MF_01970}; EC=3.7.1.3 {ECO:0000255|HAMAP-Rule:MF_01970};; L-kynurenine hydrolase {ECO:0000255|HAMAP-Rule:MF_01970}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
Kynureninase Tax=Salinispora tropica RepID=KYNU_SALTO
kynureninase
PLM3-1_50_b1_sep16_scaffold_704_14
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(12325..13431)
DNA (1107bp) protein (369aa)
Uncharacterized protein Tax=Gordonia rhizosphera NBRC 16068 RepID=K6V3G7_9ACTO
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3-1_50_b1_sep16_scaffold_704_15
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(13389..13694)
DNA (306bp) protein (102aa)
hypothetical protein Tax=Streptomyces canus RepID=UPI00036E9B3C
beta-lactamase domain-containing protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3-1_50_b1_sep16_scaffold_704_16
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(13699..14583)
DNA (885bp) protein (295aa)
Uncharacterized protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C790_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ39736.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM3-1_50_b1_sep16_scaffold_704_17
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(14739..15671)
DNA (933bp) protein (311aa)
fructose-1,6-bisphosphatase (EC:3.1.3.11); K02446 fructose-1,6-bisphosphatase II [EC:3.1.3.11] bin=bin8_Chloro species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin8_Chloro organism_group=Chloroflexi
fructose-1,6-bisphosphatase (EC:3.1.3.11)
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_704_18
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(15671..17137)
DNA (1467bp) protein (489aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] bin=bin8_Chloro species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10)
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_704_19
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

17254..17697
DNA (444bp) protein (148aa)
id=4015587 bin=GWC2_Chloroflexi_73_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_704_20
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

17712..18194
DNA (483bp) protein (161aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_704_21
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(18270..19796)
DNA (1527bp) protein (509aa)
Uncharacterized protein Tax=Ilumatobacter coccineus YM16-304 RepID=M5A1R0_9ACTN
hypothetical protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_704_22
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(19983..20648)
DNA (666bp) protein (222aa)
NUDIX hydrolase bin=bin8_Chloro species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
NUDIX hydrolase
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_704_23
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(20693..23443)
DNA (2751bp) protein (917aa)
ATP-dependent chaperone ClpB; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB bin=bin8_Chloro species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
ATP-dependent chaperone ClpB
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_704_24
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(23455..24519)
DNA (1065bp) protein (355aa)
Molecular chaperone DnaJ bin=GWC2_Chloroflexi_73_18 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_704_25
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(24675..27170)
DNA (2496bp) protein (832aa)
lon; ATP-dependent protease La (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
Lon; ATP-dependent Lon protease
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_704_26
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(27215..27604)
DNA (390bp) protein (130aa)
MerR family transcriptional regulator; K13640 MerR family transcriptional regulator, heat shock protein HspR bin=bin8_Chloro species=Deinococcus sp. 2009 genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin8_Chloro organism_group=Chloroflexi
MerR family transcriptional regulator
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_704_27
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(27825..28505)
DNA (681bp) protein (227aa)
potassium channel-like protein; K03499 trk system potassium uptake protein TrkA bin=bin8_Chloro species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
TrkA-N domain-containing protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_704_28
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(28508..28945)
DNA (438bp) protein (146aa)
TrkA-N domain protein bin=GWC2_Chloroflexi_73_18 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
TrkA-N domain-containing protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_704_29
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(28942..29400)
DNA (459bp) protein (153aa)
UspA domain-containing protein bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
UspA domain-containing protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_704_30
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(29476..30552)
DNA (1077bp) protein (359aa)
hypothetical protein bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_RIF_CHLX_69_14_curated
Displaying items 1-30 of 57 in total

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