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PLM3-1_50_b1_sep16_scaffold_755

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_755_1
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(3..1553)
DNA (1551bp) protein (517aa)
TolB-related protein bin=bin8_Chloro species=Amycolatopsis mediterranei genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_755_2
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(1550..2128)
DNA (579bp) protein (193aa)
LuxR family transcriptional regulator bin=bin8_Chloro tax=bin8_Chloro organism_group=Chloroflexi
RNA polymerase, sigma-24 subunit, ECF subfamily
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_755_3
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

2199..3044
DNA (846bp) protein (282aa)
Histone acetyltransferase HPA2 protein Tax=Herbaspirillum frisingense GSF30 RepID=R0FRI5_9BURK
hypothetical protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_755_4
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

3125..3634
DNA (510bp) protein (170aa)
id=14629310 bin=bin8_Chloro tax=bin8_Chloro organism_group=Chloroflexi
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_755_5
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(3658..5856)
DNA (2199bp) protein (733aa)
DNA ligase (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] bin=bin8_Chloro species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
NAD-dependent DNA ligase (EC:6.5.1.2)
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_755_6
Brevibacillus borstelensis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6053..6415
DNA (363bp) protein (121aa)
Ankyrin Tax=Brevibacillus borstelensis AK1 RepID=M8E1L9_9BACL
Ankyrin {ECO:0000313|EMBL:EMT53156.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus borstelensis AK1.;"
ankyrin
PLM3-1_50_b1_sep16_scaffold_755_7
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(6412..9066)
DNA (2655bp) protein (885aa)
pcrA; ATP-dependent DNA helicase (EC:3.6.1.-)
UvrD/REP helicase bin=GWC2_Chloroflexi_73_18 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_755_8
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(9124..9924)
DNA (801bp) protein (267aa)
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_755_9
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(10118..11743)
DNA (1626bp) protein (542aa)
chaperonin GroEL; K04077 chaperonin GroEL bin=bin8_Chloro species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
molecular chaperone GroEL
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_755_10
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(11855..12169)
DNA (315bp) protein (105aa)
groS; chaperonin, 10 kDa; K04078 chaperonin GroES bin=bin8_Chloro species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
chaperonin Cpn10
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3-1_50_b1_sep16_scaffold_755_11
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(12400..13191)
DNA (792bp) protein (264aa)
TatD family hydrolase; K03424 TatD DNase family protein [EC:3.1.21.-] bin=bin8_Chloro species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
TatD family hydrolase
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_755_12
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

13238..13684
DNA (447bp) protein (149aa)
hypothetical protein Tax=Streptomyces violaceoniger RepID=UPI0003C76E21
hypothetical protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_755_13
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists


comp(13681..15330)
DNA (1650bp) protein (550aa)
methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10] bin=bin8_Chloro species=Methylopila sp. M107 genus=Methylopila taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
Methionyl-tRNA synthetase
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_755_14
Streptomyces sp. NRRL S-444, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15396..15614
DNA (219bp) protein (73aa)
Uncharacterized protein Tax=Streptomyces sp. PVA 94-07 RepID=V4IUC4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJY46082.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-444.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_755_15
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(15645..17909)
DNA (2265bp) protein (755aa)
Bifunctional purine biosynthesis protein PurH bin=GWC2_Chloroflexi_73_18 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
IMP cyclohydrolase / phosphoribosylaminoimidazolecarboxamide formyltransferase
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3-1_50_b1_sep16_scaffold_755_16
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(17906..19048)
DNA (1143bp) protein (381aa)
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase bin=GWC2_Chloroflexi_73_18 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3-1_50_b1_sep16_scaffold_755_17
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(19035..20504)
DNA (1470bp) protein (490aa)
amidophosphoribosyltransferase (EC:2.4.2.14); K00764 amidophosphoribosyltransferase [EC:2.4.2.14] bin=bin8_Chloro species=unknown genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
amidophosphoribosyltransferase
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_755_18
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(20509..22674)
DNA (2166bp) protein (722aa)
phosphoribosylformylglycinamidine synthase 2 (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] bin=bin8_Chloro species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3)
Tax=CSP1_4_Chloroflexi
PLM3-1_50_b1_sep16_scaffold_755_19
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(22735..23487)
DNA (753bp) protein (251aa)
purQ; phosphoribosylformylglycinamidine synthase I (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 1 bin=GWC2_Chloroflexi_73_18 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_755_20
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(23487..23768)
DNA (282bp) protein (94aa)
Phosphoribosylformylglycinamidine synthase subunit PurS bin=GWC2_Chloroflexi_73_18 species=Aeromicrobium marinum genus=Aeromicrobium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
phosphoribosylformylglycinamidine synthase, purS
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_755_21
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(23765..24289)
DNA (525bp) protein (175aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase bin=GWC2_Chloroflexi_73_18 species=Alkalilimnicola ehrlichii genus=Alkalilimnicola taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
phosphoribosylaminoimidazole-succinocarboxamide synthase
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_755_22
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(24838..26187)
DNA (1350bp) protein (450aa)
purB; adenylosuccinate lyase (EC:4.3.2.2); K01756 adenylosuccinate lyase [EC:4.3.2.2] bin=bin8_Chloro species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=bin8_Chloro organism_group=Chloroflexi
adenylosuccinate lyase
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_755_23
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(26184..27527)
DNA (1344bp) protein (448aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13); K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] bin=bin8_Chloro species=Granulibacter bethesdensis genus=Granulibacter taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
phosphoribosylamine--glycine ligase
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_755_24
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(27524..28876)
DNA (1353bp) protein (451aa)
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase bin=GWC2_Chloroflexi_73_18 species=unknown genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_755_25
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

29192..30928
DNA (1737bp) protein (579aa)
diguanylate cyclase and metal dependent phosphohydrolase bin=bin8_Chloro species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
diguanylate cyclase
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_755_26
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

31071..31562
DNA (492bp) protein (164aa)
single-strand binding protein bin=GWC2_Chloroflexi_73_18 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
single-strand binding protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3-1_50_b1_sep16_scaffold_755_27
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(31634..32770)
DNA (1137bp) protein (379aa)
calcium/proton exchanger; K07300 Ca2+:H+ antiporter bin=bin8_Chloro species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
calcium/proton exchanger
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_755_28
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(32833..33774)
DNA (942bp) protein (314aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI00036E1F83
ribokinase
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_755_29
Candidatus Actinomarina minuta, Candidatus Actinomarina, Candidatus Actinomarinales, Candidatus Actinomarinidae, Actinobacteria, Bacteria

Not on your lists

comp(33783..34676)
DNA (894bp) protein (298aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI000367BF95
ABC-type cobalt transport system permease component CbiQ {ECO:0000313|EMBL:AGQ19799.1}; species="Bacteria; Actinobacteria; Candidatus Actinomarinidae; Candidatus Actinomarinales; Candidatus Actinomarineae; Candidatus Actinomarinaceae; Candidatus Actinomarina.;" source="Candidatus Actinomarina minuta.;"
cobalt transporter
PLM3-1_50_b1_sep16_scaffold_755_30
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34677..35534)
DNA (858bp) protein (286aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI000375CC1E
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP68306.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella glycerini.;"
cobalt/nickel ABC transporter ATP-binding protein
Displaying items 1-30 of 39 in total

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