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PLM3-1_50_b1_sep16_scaffold_862

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_862_1
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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comp(3..866)
DNA (864bp) protein (288aa)
hypothetical protein bin=bin8_Chloro species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
UspA domain-containing protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_862_2
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(904..1302)
DNA (399bp) protein (133aa)
uspA; Nucleotide-binding protein, UspA family bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Verrucomicrobia tax=bin8_Chloro organism_group=Chloroflexi
UspA domain-containing protein
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_50_b1_sep16_scaffold_862_3
unknown

Not on your lists

comp(1476..1685)
DNA (210bp) protein (70aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_862_4
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(1810..2304)
DNA (495bp) protein (165aa)
Hydrogenase maturation protease Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RUD5_ALLVD
hydrogenase maturation protease
Tax=GWF2_Verrucomicrobia_62_7_curated
PLM3-1_50_b1_sep16_scaffold_862_5
BJP_IG2102_BRC1_58_13, BRC1, Bacteria

Not on your lists

comp(2301..3722)
DNA (1422bp) protein (474aa)
Bidirectional hydrogenase H subunit Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N4C5_ANATU
hoxH; bidirectional hydrogenase subunit H
Tax=BJP_IG2102_BRC1_58_13
PLM3-1_50_b1_sep16_scaffold_862_6
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(3731..4261)
DNA (531bp) protein (177aa)
Bidirectional hydrogenase Y subunit Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N4C4_ANATU
hoxY; bidirectional hydrogenase subunit Y
Bidirectional hydrogenase Y subunit {ECO:0000313|EMBL:BAJ63288.1}; species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
PLM3-1_50_b1_sep16_scaffold_862_7
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4258..4974)
DNA (717bp) protein (239aa)
bidirectional hydrogenase complex protein HoxU (EC:1.12.1.2)
Hydrogen dehydrogenase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WJ2_SOLUE
Bidirectional hydrogenase complex protein HoxU {ECO:0000313|EMBL:KGO33792.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus sp. Tol-SR.;"
PLM3-1_50_b1_sep16_scaffold_862_8
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4971..6629)
DNA (1659bp) protein (553aa)
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C0J1_DESTA
NADH dehydrogenase {ECO:0000313|EMBL:KGO33773.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus sp. Tol-SR.;"
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit
PLM3-1_50_b1_sep16_scaffold_862_9
Marichromatium purpuratum, Marichromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6626..7117)
DNA (492bp) protein (164aa)
NADH dehydrogenase (Ubiquinone) 24 kDa subunit Tax=Marichromatium purpuratum 984 RepID=F9TVU4_MARPU
hydrogenase HoxE
Hydrogenase HoxE {ECO:0000313|EMBL:AHF03346.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Marichromatium.;" source="Marichromatium purpuratum 984.;"
PLM3-1_50_b1_sep16_scaffold_862_10
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

7366..11016
DNA (3651bp) protein (1217aa)
nifJ2; pyruvate:ferredoxin (Flavodoxin) oxidoreductase (EC:1.2.7.-)
Pyruvate-flavodoxin oxidoreductase Tax=Austwickia chelonae NBRC 105200 RepID=K6VQ95_9MICO
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_862_11
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

11013..12050
DNA (1038bp) protein (346aa)
Dihydroorotate dehydrogenase Tax=Chloroflexus RepID=A9WEX8_CHLAA
dihydroorotate dehydrogenase
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_50_b1_sep16_scaffold_862_12
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

12124..12375
DNA (252bp) protein (84aa)
Hydrogenase assembly chaperone HypC/HupF Tax=Selenomonas sp. oral taxon 138 str. F0429 RepID=L1N3J4_9FIRM
hydrogenase expression/formation protein HupF/HypC
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_862_13
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

12351..13286
DNA (936bp) protein (312aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3-1_50_b1_sep16_scaffold_862_14
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

13258..14037
DNA (780bp) protein (260aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_50_b1_sep16_scaffold_862_15
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(14210..15268)
DNA (1059bp) protein (353aa)
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] bin=bin8_Chloro species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Tax=RBG_16_RIF_CHLX_69_14_curated
Displaying 15 items

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