ggKbase home page

PLM3_127_b1_sep16_scaffold_26823

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b1_sep16_scaffold_26823_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2..88
DNA (87bp) protein (29aa)
Cold-shock DNA-binding domain protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cold-shock protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b1_sep16_scaffold_26823_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

384..587
DNA (204bp) protein (68aa)
Cold-shock DNA-binding domain protein bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
cold-shock DNA-binding domain-containing protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_26823_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(1045..1338)
DNA (294bp) protein (98aa)
Competence protein ComEA helix-hairpin-helix repeat protein bin=GWC2_Methylomirabilis_70_16 species=Paenibacillus sp. Aloe-11 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Competence protein ComEA helix-hairpin-helix region
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b1_sep16_scaffold_26823_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1437..1748)
DNA (312bp) protein (104aa)
HNH endonuclease family protein bin=GWC2_Methylomirabilis_70_24 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
HNH endonuclease family protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_26823_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1745..2911)
DNA (1167bp) protein (389aa)
ABC transporter related bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Eggerthella taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Uup; ABC transporter ATPase
Tax=GWA2_Rokubacteria_73_35_curated
Displaying 5 items

View Taxonomy