ggKbase home page

PLM3_127_b1_sep16_scaffold_9488

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b1_sep16_scaffold_9488_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3..569)
DNA (567bp) protein (189aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b1_sep16_scaffold_9488_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

574..2091
DNA (1518bp) protein (506aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Caminibacter mediatlanticus genus=Caminibacter taxon_order=Nautiliales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b1_sep16_scaffold_9488_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

2108..3391
DNA (1284bp) protein (428aa)
ATP-binding region, ATPase-like:Histidine kinase A-like bin=GWC2_Methylomirabilis_70_24 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
histidine kinase
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b1_sep16_scaffold_9488_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

3384..4808
DNA (1425bp) protein (475aa)
Two component, sigma54 specific, transcriptional regulator, Fis family bin=GWC2_Methylomirabilis_70_24 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Fis family transcriptional regulator
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_9488_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

4805..5677
DNA (873bp) protein (291aa)
Enoyl-CoA hydratase Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IRI9_RHOCS
enoyl-CoA hydratase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b1_sep16_scaffold_9488_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

5691..6851
DNA (1161bp) protein (387aa)
id=3014946 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative transporter
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_9488_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6924..7112)
DNA (189bp) protein (63aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Leptospirillum ferrodiazotrophum genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_9488_8
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7180..7749
DNA (570bp) protein (190aa)
phosphohydrolase Tax=Verminephrobacter aporrectodeae RepID=UPI0002378598
HD phosphohydrolase {ECO:0000313|EMBL:EHP38168.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
hypothetical protein
Displaying 8 items

View Taxonomy