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PLM3_127_b1_sep16_scaffold_2161

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b1_sep16_scaffold_2161_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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2..388
DNA (387bp) protein (129aa)
Glutamine amidotransferase of anthranilate synthase bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
glutamine amidotransferase of anthranilate synthase
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b1_sep16_scaffold_2161_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

385..1149
DNA (765bp) protein (255aa)
Thiamine-monophosphate kinase bin=GWC2_Methylomirabilis_70_16 species=Heliobacterium modesticaldum genus=Heliobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
thiL; thiamine-monophosphate kinase
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b1_sep16_scaffold_2161_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1146..1349
DNA (204bp) protein (68aa)
Thiamine-monophosphate kinase bin=GWF2_Methylomirabilis_70_14 species=Heliobacterium modesticaldum genus=Heliobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_2161_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1342..2622
DNA (1281bp) protein (427aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_2161_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

2619..3881
DNA (1263bp) protein (421aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_2161_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

4091..4765
DNA (675bp) protein (225aa)
dienelactone hydrolase-like enzyme (EC:3.1.1.45)
Dienelactone hydrolase-like enzyme bin=GWC2_Methylomirabilis_70_24 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_2161_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists


comp(4896..5390)
DNA (495bp) protein (165aa)
50S ribosomal protein L17 bin=GWC2_Methylomirabilis_70_16 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rplQ; 50S ribosomal protein L17
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b1_sep16_scaffold_2161_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(5387..6373)
DNA (987bp) protein (329aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha bin=GWC2_Methylomirabilis_70_16 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b1_sep16_scaffold_2161_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists


comp(6402..7025)
DNA (624bp) protein (208aa)
30S ribosomal protein S4 bin=GWF2_Methylomirabilis_70_14 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpsD; 30S ribosomal protein S4
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b1_sep16_scaffold_2161_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


comp(7038..7466)
DNA (429bp) protein (143aa)
Ribosomal protein S11 bin=GWC2_Methylomirabilis_70_24 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
30S ribosomal protein S11
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_2161_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists


comp(7479..7883)
DNA (405bp) protein (135aa)
Ribosomal protein S13 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
SSU ribosomal protein S13P
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b1_sep16_scaffold_2161_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7892..8005)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_2161_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8109..8327)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
infA; translation initiation factor IF-1
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_2161_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8342..9103)
DNA (762bp) protein (254aa)
Methionine aminopeptidase bin=GWC2_Methylomirabilis_70_24 species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
map; methionine aminopeptidase, type i
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_2161_15
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(9100..9759)
DNA (660bp) protein (220aa)
Adenylate kinase bin=GWF2_Methylomirabilis_70_14 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
adk; adenylate kinase
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b1_sep16_scaffold_2161_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists


comp(9756..10547)
DNA (792bp) protein (264aa)
Protein translocase subunit SecY bin=GWC2_Methylomirabilis_70_16 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
secY; preprotein translocase subunit SecY
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 16 items

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