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PLM3_127_b2_sep16_scaffold_13106

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_13106_1
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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2..349
DNA (348bp) protein (116aa)
carbon monoxide dehydrogenase large subunit Tax=Herbaspirillum lusitanum RepID=UPI000361F44B
aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL-like protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3_127_b2_sep16_scaffold_13106_2
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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392..862
DNA (471bp) protein (157aa)
carbon monoxide dehydrogenase large subunit Tax=Herbaspirillum lusitanum RepID=UPI000361F44B
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein {ECO:0000313|EMBL:EJL88379.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL-like protein
PLM3_127_b2_sep16_scaffold_13106_3
Mycobacterium marinum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(978..1499)
DNA (522bp) protein (174aa)
Uncharacterized protein Tax=Mycobacterium marinum (strain ATCC BAA-535 / M) RepID=B2HJA6_MYCMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACC38575.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium marinum (strain ATCC BAA-535 / M).;"
PLM3_127_b2_sep16_scaffold_13106_4
Mycobacterium chubuense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1533..2039)
DNA (507bp) protein (169aa)
Coenzyme F390 synthetase Tax=Mycobacterium chubuense (strain NBB4) RepID=I4BG64_MYCCN
coenzyme F390 synthetase
Coenzyme F390 synthetase {ECO:0000313|EMBL:AFM16271.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chubuense (strain NBB4).;"
PLM3_127_b2_sep16_scaffold_13106_5
unknown

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comp(2143..2268)
DNA (126bp) protein (42aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_13106_6
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2887..3303)
DNA (417bp) protein (139aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
PLM3_127_b2_sep16_scaffold_13106_7
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3300..3557)
DNA (258bp) protein (86aa)
id=3847105 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
PLM3_127_b2_sep16_scaffold_13106_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(3631..4221)
DNA (591bp) protein (197aa)
Ribonuclease VapC Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBX1_CONWI
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_127_b2_sep16_scaffold_13106_9
RLO_Entotheonella_69_37, Entotheonella, Bacteria

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comp(4293..5948)
DNA (1656bp) protein (552aa)
FdrA family protein; K02381 FdrA protein bin=bin9_gal15 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
protein fdrA
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
PLM3_127_b2_sep16_scaffold_13106_10
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5968..7260)
DNA (1293bp) protein (431aa)
Putative uncharacterized protein bin=GWB1_Spirochaetales_60_80 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
Uncharacterized protein {ECO:0000313|EMBL:KGM16277.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_13106_11
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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comp(7260..8357)
DNA (1098bp) protein (366aa)
Oligopeptide transport ATP-binding protein appF Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L2R2_THERP
oligopeptide transport ATP-binding protein OppF
Oligopeptide transport ATP-binding protein appF {ECO:0000313|EMBL:ACM06162.1}; species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
PLM3_127_b2_sep16_scaffold_13106_12
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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comp(8368..9174)
DNA (807bp) protein (269aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00036272E0
putative oligopeptide ABC transporter ATP-binding protein
Putative oligopeptide transport atp-binding abc transporter protein {ECO:0000313|EMBL:ACM05447.1}; species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
PLM3_127_b2_sep16_scaffold_13106_13
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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comp(9305..10162)
DNA (858bp) protein (286aa)
Maltose ABC transporter, permease Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L2Q8_THERP
maltose ABC transporter permease
Maltose ABC transporter, permease {ECO:0000313|EMBL:ACM05736.1}; species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
PLM3_127_b2_sep16_scaffold_13106_14
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(10169..11173)
DNA (1005bp) protein (335aa)
Oligopeptide ABC transporter, permease protein Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L2Q9_THERP
oligopeptide ABC transporter permease
Oligopeptide ABC transporter, permease protein {ECO:0000313|EMBL:ACM04698.1}; species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
PLM3_127_b2_sep16_scaffold_13106_15
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(11246..12121)
DNA (876bp) protein (292aa)
Bacterial extracellular solute-binding proteins, family 5 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L2R0_THERP
extracellular solute-binding protein
Bacterial extracellular solute-binding proteins, family 5 {ECO:0000313|EMBL:ACM05548.1}; species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
Displaying 15 items

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