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PLM3_127_b2_sep16_scaffold_10907

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_10907_1
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..476
-----------------
DNA (474bp)
protein (158aa)
Site-specific recombinase, phage integrase family Tax=Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535 RepID=D4T2E4_9XANT
Integrase {ECO:0000313|EMBL:KGQ20755.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
phage integrase family protein
PLM3_127_b2_sep16_scaffold_10907_trna_1
unknown

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comp(487..570)
-----------------
DNA (84bp)
transferRNA Leu
PLM3_127_b2_sep16_scaffold_10907_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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642..1115
-----------------
DNA (474bp)
protein (158aa)
SsrA-binding protein bin=GWF2_Methylomirabilis_70_14 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
smpB; SsrA-binding protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_10907_3
unknown

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comp(1560..2219)
-----------------
DNA (660bp)
protein (220aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_10907_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(2438..2662)
-----------------
DNA (225bp)
protein (75aa)
30S ribosomal protein S21 bin=GWA2_Methylomirabilis_73_35 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
30S ribosomal protein S21
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_10907_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(2638..2976)
-----------------
DNA (339bp)
protein (113aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_10907_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2933..3481)
-----------------
DNA (549bp)
protein (183aa)
Glycine-rich RNA binding protein bin=GWF2_Methylomirabilis_70_14 species=Coprinopsis cinerea genus=Coprinopsis taxon_order=Agaricales taxon_class=Agaricomycetes phylum=Basidiomycota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative RNA-binding protein RbpA
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_10907_7
unknown

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comp(3500..3700)
-----------------
DNA (201bp)
protein (67aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_10907_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(4229..5440)
-----------------
DNA (1212bp)
protein (404aa)
60 kDa chaperonin bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
groL; 60 kDa chaperonin (Protein Cpn60) (groEL protein)
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 9 items

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