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PLM3_127_b2_sep16_scaffold_2156

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_2156_1
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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309..1307
-----------------
DNA (999bp)
protein (333aa)
hypothetical protein Tax=Methylobacter marinus RepID=UPI00036EE564
Hydroxymethylglutaryl-CoA reductase {ECO:0000313|EMBL:AKF09145.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
nucleoside diphosphate sugar epimerase
PLM3_127_b2_sep16_scaffold_2156_2
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1304..2698
-----------------
DNA (1395bp)
protein (465aa)
cyp51; cytochrome P450 51 (EC:1.14.13.70)
Unspecific monooxygenase Tax=Streptomyces ipomoeae 91-03 RepID=L1KHQ9_9ACTO
Cytochrome P450 51 {ECO:0000313|EMBL:KIG16756.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
PLM3_127_b2_sep16_scaffold_2156_3
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2695..3855
-----------------
DNA (1161bp)
protein (387aa)
Dioxygenase, iron-sulfur subunit, putative Tax=Plesiocystis pacifica SIR-1 RepID=A6FX87_9DELT
Vanillate O-demethylase oxygenase subunit {ECO:0000313|EMBL:AKF09144.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
dioxygenase, iron-sulfur subunit
PLM3_127_b2_sep16_scaffold_2156_4
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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3861..5828
-----------------
DNA (1968bp)
protein (656aa)
hypothetical protein Tax=Methylococcus capsulatus RepID=UPI000375554C
squalene cyclase
Squalene cyclase family protein {ECO:0000313|EMBL:AAU91075.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
PLM3_127_b2_sep16_scaffold_2156_5
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5812..6933)
-----------------
DNA (1122bp)
protein (374aa)
Flavoprotein monooxygenase Tax=Cystobacter fuscus DSM 2262 RepID=S9QJM1_9DELT
Flavoprotein monooxygenase {ECO:0000313|EMBL:EPX56658.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
geranylgeranyl reductase
PLM3_127_b2_sep16_scaffold_2156_6
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6930..8051)
-----------------
DNA (1122bp)
protein (374aa)
Monooxygenase family protein Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q603D5_METCA
Uncharacterized protein {ECO:0000313|EMBL:AKF85641.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
monooxygenase
PLM3_127_b2_sep16_scaffold_2156_7
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8261..8749)
-----------------
DNA (489bp)
protein (163aa)
Delta(14)-sterol reductase {ECO:0000313|EMBL:CCE23001.1}; EC=1.3.1.70 {ECO:0000313|EMBL:CCE23001.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM; B-2133 / 20Z).;"
hypothetical protein Tax=Methylomicrobium buryatense RepID=UPI000347A446
erg; delta(14)-sterol reductase
PLM3_127_b2_sep16_scaffold_2156_8
unknown

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8841..9575
-----------------
DNA (735bp)
protein (245aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_2156_9
unknown

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comp(9506..9859)
-----------------
DNA (354bp)
protein (118aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_2156_10
unknown

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10263..10364
-----------------
DNA (102bp)
protein (34aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_2156_11
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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10925..11161
-----------------
DNA (237bp)
protein (79aa)
Peptidase S15 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LEW8_SYNFM
peptidase S15
Peptidase S15 {ECO:0000313|EMBL:ABK15970.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
PLM3_127_b2_sep16_scaffold_2156_12
Lyngbya sp. PCC 8106, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(11158..11652)
-----------------
DNA (495bp)
protein (165aa)
Uncharacterized protein Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YQK0_LYNSP
Uncharacterized protein {ECO:0000313|EMBL:EAW36782.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya sp. (strain PCC 8106) (Lyngbya aestuarii (strain CCY9616)).;"
helicase
PLM3_127_b2_sep16_scaffold_2156_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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12005..13018
-----------------
DNA (1014bp)
protein (338aa)
TRAP-T family transporter bin=GWF2_Methylomirabilis_70_14 species=Clostridiales bacterium 1_7_47FAA genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TRAP-T family transporter
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_2156_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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13006..14766
-----------------
DNA (1761bp)
protein (587aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00037C6452
metal-dependent hydrolase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_2156_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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14759..16660
-----------------
DNA (1902bp)
protein (634aa)
TRAP transporter, 4TM/12TM fusion protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TRAP transporter, 4TM/12TM fusion protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_2156_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

16783..18273
-----------------
DNA (1491bp)
protein (497aa)
benzoate transporter Tax=Mycobacterium intracellulare RepID=UPI0001B45C8B
beta subunit of phenylphosphate carboxylase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_2156_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

18270..19385
-----------------
DNA (1116bp)
protein (372aa)
L-Alanine-DL-glutamate epimerase bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative racemase
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_2156_18
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

19446..20129
-----------------
DNA (684bp)
protein (228aa)
TENA/THI-4 family protein Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1Y0Z8_ANEAE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_127_b2_sep16_scaffold_2156_19
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

20126..20437
-----------------
DNA (312bp)
protein (104aa)
Putative ferredoxin Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I491_CALAS
putative ferredoxin
Putative ferredoxin {ECO:0000313|EMBL:BAM00079.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM3_127_b2_sep16_scaffold_2156_20
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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20438..20869
-----------------
DNA (432bp)
protein (144aa)
ATP/cobalamin adenosyltransferase Tax=Bacillus sp. 1NLA3E RepID=N0B195_9BACI
Uncharacterized protein {ECO:0000313|EMBL:ETX00893.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
ATP/cobalamin adenosyltransferase
PLM3_127_b2_sep16_scaffold_2156_21
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20871..21347
-----------------
DNA (477bp)
protein (159aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4XVP7_SORCE
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EYF04141.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_2156_22
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

21379..22038
-----------------
DNA (660bp)
protein (220aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
carboxymuconolactone decarboxylase family protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_2156_23
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(21980..23161)
-----------------
DNA (1182bp)
protein (394aa)
Fosmidomycin resistance protein bin=GWA2_Methylomirabilis_73_35 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
major facilitator superfamily MFS_1
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_2156_24
unknown

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23209..23310
-----------------
DNA (102bp)
protein (34aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_2156_25
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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23452..24087
-----------------
DNA (636bp)
protein (212aa)
cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17)
ATP:cob(I)alamin adenosyltransferase bin=GWA2_Methylomirabilis_73_35 species=SAR324 cluster bacterium JCVI-SC AAA005 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_2156_26
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(24122..24958)
-----------------
DNA (837bp)
protein (279aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily bin=GWF2_Methylomirabilis_70_14 species=Bradyrhizobium sp. WSM471 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Alpha/beta hydrolase fold
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Displaying 26 items

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