name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
PLM3_127_b2_sep16_scaffold_2614_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria
|
Not on your lists |
1..162
----------------- DNA (162bp) protein (54aa) |
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 bin=bin7_NC10_sister species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
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PLM3_127_b2_sep16_scaffold_2614_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
166..810
----------------- DNA (645bp) protein (215aa) |
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 bin=bin7_NC10_sister species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
rpsC; 30S ribosomal protein S3
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
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PLM3_127_b2_sep16_scaffold_2614_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
821..1237
----------------- DNA (417bp) protein (139aa) |
50S ribosomal protein L16 bin=GWC2_Methylomirabilis_70_16 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
50S ribosomal protein L16
Tax=GWA2_Rokubacteria_73_35_curated
|
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PLM3_127_b2_sep16_scaffold_2614_4
R_Rokubacteria_69_13, Rokubacteria, Bacteria
|
Not on your lists |
1249..1452
----------------- DNA (204bp) protein (68aa) |
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 bin=bin7_NC10_sister species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
50S ribosomal protein L29
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
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PLM3_127_b2_sep16_scaffold_2614_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
1620..1868
----------------- DNA (249bp) protein (83aa) |
30S ribosomal protein S17 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
30S ribosomal protein S17
Tax=GWA2_Rokubacteria_73_35_curated
|
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PLM3_127_b2_sep16_scaffold_2614_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
1890..2240
----------------- DNA (351bp) protein (117aa) |
50S ribosomal protein L14 bin=GWA2_Methylomirabilis_73_35 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rplN; 50S ribosomal protein L14
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
|
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PLM3_127_b2_sep16_scaffold_2614_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
2240..2566
----------------- DNA (327bp) protein (109aa) |
50S ribosomal protein L24 bin=GWA2_Methylomirabilis_73_35 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rplX; 50S ribosomal protein L24
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
|
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PLM3_127_b2_sep16_scaffold_2614_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
2572..3243
----------------- DNA (672bp) protein (224aa) |
50S ribosomal protein L5 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rplE; 50S ribosomal protein L5
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
|
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PLM3_127_b2_sep16_scaffold_2614_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
3250..3435
----------------- DNA (186bp) protein (62aa) |
50S ribosomal protein L5 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpsZ; 30S ribosomal protein S14
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
|
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PLM3_127_b2_sep16_scaffold_2614_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
3438..3833
----------------- DNA (396bp) protein (132aa) |
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 bin=bin7_NC10_sister species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
30S ribosomal protein S8
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
|
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PLM3_127_b2_sep16_scaffold_2614_11
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
3840..4382
----------------- DNA (543bp) protein (181aa) |
50S ribosomal protein L6 bin=GWC2_Methylomirabilis_70_16 species=Leptolyngbya sp. PCC 6406 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rplF; 50S ribosomal protein L6
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
|
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PLM3_127_b2_sep16_scaffold_2614_12
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
4379..4744
----------------- DNA (366bp) protein (122aa) |
50S ribosomal protein L18 bin=GWC2_Methylomirabilis_70_16 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rplR; 50S ribosomal protein L18
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
|
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PLM3_127_b2_sep16_scaffold_2614_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
4840..5373
----------------- DNA (534bp) protein (178aa) |
30S ribosomal protein S5 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
30S ribosomal protein S5
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
|
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PLM3_127_b2_sep16_scaffold_2614_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
5357..5542
----------------- DNA (186bp) protein (62aa) |
50S ribosomal protein L30 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
50S ribosomal protein L30
Tax=GWA2_Rokubacteria_73_35_curated
|
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PLM3_127_b2_sep16_scaffold_2614_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
5532..5999
----------------- DNA (468bp) protein (156aa) |
50S ribosomal protein L15 bin=GWA2_Methylomirabilis_73_35 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rplO; 50S ribosomal protein L15
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
|
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PLM3_127_b2_sep16_scaffold_2614_16
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
5996..7330
----------------- DNA (1335bp) protein (445aa) |
Protein translocase subunit SecY bin=GWC2_Methylomirabilis_70_16 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
secY; preprotein translocase subunit SecY
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
|
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PLM3_127_b2_sep16_scaffold_2614_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
7392..8075
----------------- DNA (684bp) protein (228aa) |
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] bin=bin7_NC10_sister species=Thermodesulfobacterium thermophilum genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin7_NC10_sister organism_group=NC10
adenylate kinase (EC:2.7.4.3)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
|
|
PLM3_127_b2_sep16_scaffold_2614_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
8072..8845
----------------- DNA (774bp) protein (258aa) |
methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] bin=bin7_NC10_sister species=Orenia marismortui genus=Orenia taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
methionine aminopeptidase, type I (EC:3.4.11.18)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
|
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PLM3_127_b2_sep16_scaffold_2614_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
8856..9101
----------------- DNA (246bp) protein (82aa) |
Translation initiation factor IF-1 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
infA; translation initiation factor IF-1
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
|
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PLM3_127_b2_sep16_scaffold_2614_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
9126..9239
----------------- DNA (114bp) protein (38aa) |
50S ribosomal protein L36 bin=GWA2_Methylomirabilis_73_35 species=Propionibacterium freudenreichii genus=Propionibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
|
|
PLM3_127_b2_sep16_scaffold_2614_21
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
9251..9655
----------------- DNA (405bp) protein (135aa) |
30S ribosomal protein S13 bin=GWA2_Methylomirabilis_73_35 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpsM; 30S ribosomal protein S13
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
|
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PLM3_127_b2_sep16_scaffold_2614_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
9659..10069
----------------- DNA (411bp) protein (137aa) |
30S ribosomal protein S11 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
30S ribosomal protein S11
Tax=GWA2_Rokubacteria_73_35_curated
|
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PLM3_127_b2_sep16_scaffold_2614_23
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
10079..10702
----------------- DNA (624bp) protein (208aa) |
30S ribosomal protein S4 bin=GWA2_Methylomirabilis_73_35 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpsD; 30S ribosomal protein S4
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
|
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PLM3_127_b2_sep16_scaffold_2614_24
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
10717..11697
----------------- DNA (981bp) protein (327aa) |
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha bin=GWA2_Methylomirabilis_73_35 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
|
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PLM3_127_b2_sep16_scaffold_2614_25
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
11694..12161
----------------- DNA (468bp) protein (156aa) |
50S ribosomal protein L17 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
50S ribosomal protein L17
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
|