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PLM3_127_b2_sep16_scaffold_2875

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_2875_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2..1084
DNA (1083bp) protein (361aa)
FO synthase subunit 1 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cofG; FO synthase subunit 1
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_2875_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1062..2327
DNA (1266bp) protein (422aa)
cofH; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase (EC:2.5.1.-)
FO synthase subunit 2 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_2875_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

2409..2684
DNA (276bp) protein (92aa)
Transcriptional dual regulator HU-beta bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hupB; transcriptional dual regulator HU-beta
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_2875_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2671..3240
DNA (570bp) protein (190aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2875_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3315..4244
DNA (930bp) protein (310aa)
2-phospho-L-lactate transferase (EC:2.7.1.-)
2-phospho-L-lactate transferase bin=GWC2_Methylomirabilis_70_16 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_2875_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4241..4921
DNA (681bp) protein (227aa)
2-phospho-L-lactate guanylyltransferase bin=GWC2_Methylomirabilis_70_24 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2875_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4918..5667
DNA (750bp) protein (250aa)
coenzyme F420-0 gamma-glutamyl ligase; K12234 coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
coenzyme F420-0 gamma-glutamyl ligase (EC:6.3.2.-)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2875_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5682..6326
DNA (645bp) protein (215aa)
NADPH-dependent F420 reductase bin=GWA2_Methylomirabilis_73_35 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NADPH-dependent F420 reductase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2875_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6807..7259)
DNA (453bp) protein (151aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_2875_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(7256..8002)
DNA (747bp) protein (249aa)
Hydrolase, haloacid dehalogenase-like family bin=GWA2_Methylomirabilis_73_35 species=Chlorobium chlorochromatii genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2875_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7947..9029)
DNA (1083bp) protein (361aa)
class V aminotransferase (EC:2.8.1.7)
Aminotransferase class V bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_2875_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9095..9328)
DNA (234bp) protein (78aa)
SirA family protein bin=GWA2_Methylomirabilis_73_35 species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
SirA family protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2875_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9344..10282
DNA (939bp) protein (313aa)
Diguanylate cyclase bin=GWA2_Methylomirabilis_73_35 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
diguanylate cyclase with PAS/PAC, CBS and GAF sensors
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2875_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10284..11342
DNA (1059bp) protein (353aa)
response regulator receiver modulated metal dependent phosphohydrolase bin=bin7_NC10_sister species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_2875_15
unknown

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comp(11612..11965)
DNA (354bp) protein (118aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_2875_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12140..12424)
DNA (285bp) protein (95aa)
Uncharacterized protein Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12GG6_POLSJ
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_2875_17
Anaerobaculum mobile, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(12736..13812)
DNA (1077bp) protein (359aa)
Glycine reductase, selenoprotein B Tax=Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA) RepID=I4BUV0_ANAMD
glycine reductase, selenoprotein B
Glycine reductase, selenoprotein B {ECO:0000313|EMBL:AFM21057.1}; species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA).;"
PLM3_127_b2_sep16_scaffold_2875_18
RLO_Entotheonella_69_37, Entotheonella, Bacteria

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comp(13814..15082)
DNA (1269bp) protein (423aa)
Putative uncharacterized protein Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UPK0_9DELT
glycine/sarcosine/betaine reductase component B alpha/beta subunit
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
PLM3_127_b2_sep16_scaffold_2875_19
Oscillatoria nigro-viridis, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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15117..15806
DNA (690bp) protein (230aa)
Neurotransmitter-gated ion-channel ligand-binding protein Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VN17_9CYAN
neurotransmitter-gated ion-channel ligand-binding protein
Neurotransmitter-gated ion-channel ligand-binding protein {ECO:0000313|EMBL:AFZ08600.1}; Flags: Precursor;; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria nigro-viridis PCC 7112.;"
PLM3_127_b2_sep16_scaffold_2875_20
Oscillatoria nigro-viridis, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

15794..16186
DNA (393bp) protein (131aa)
Neurotransmitter-gated ion-channel ligand-binding protein Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VN17_9CYAN
neurotransmitter-gated ion-channel ligand-binding protein
Neurotransmitter-gated ion-channel ligand-binding protein {ECO:0000313|EMBL:AFZ08600.1}; Flags: Precursor;; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria nigro-viridis PCC 7112.;"
PLM3_127_b2_sep16_scaffold_2875_21
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16253..16747
DNA (495bp) protein (165aa)
hypothetical protein Tax=Methylomicrobium buryatense RepID=UPI00034904CC
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM3_127_b2_sep16_scaffold_2875_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16882..17931
DNA (1050bp) protein (350aa)
Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CBS6_DESTA
selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2875_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18201..19508
DNA (1308bp) protein (436aa)
Glycine reductase proprotein Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67KE5_SYMTH
grdE; glycine reductase proprotein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_2875_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19508..19825
DNA (318bp) protein (106aa)
glycine reductase complex protein C large subunit (EC:2.7.-.-)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036803C5
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 24 items

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