name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
PLM3_127_b2_sep16_scaffold_3575_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
comp(3..656)
----------------- DNA (654bp) protein (218aa) |
Response regulator in two-component regulatory system with KdpD, regulation of potassium translocation (OmpR family) bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
kdpE; response regulator in two-component regulatory system with KdpD, regulation of potassium translocation (OmpR family)
Tax=GWA2_Rokubacteria_73_35_curated
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PLM3_127_b2_sep16_scaffold_3575_2
R_NC10_66_22, NC10, Bacteria
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Not on your lists |
comp(649..2730)
----------------- DNA (2082bp) protein (694aa) |
kdpD; sensory histidine kinase in two-component regulatory system wtih KdpE, regulation of potassium translocation (EC:2.7.1.-)
Sensory histidine kinase in two-component regulatory system wtih KdpE, regulation of potassium translocation Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJR3_9BACT
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
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PLM3_127_b2_sep16_scaffold_3575_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria
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Not on your lists |
comp(2676..3290)
----------------- DNA (615bp) protein (205aa) |
kdpD; sensory histidine kinase in two-component regulatory system wtih KdpE, regulation of potassium translocation (EC:2.7.1.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Sensory histidine kinase in two-component regulatory system wtih KdpE, regulation of potassium translocation Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJR3_9BACT
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PLM3_127_b2_sep16_scaffold_3575_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
3637..4137
----------------- DNA (501bp) protein (167aa) |
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
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PLM3_127_b2_sep16_scaffold_3575_5
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria
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Not on your lists |
comp(4291..5634)
----------------- DNA (1344bp) protein (448aa) |
Magnesium transporter bin=GWA2_Ignavibacteria_55_11 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
magnesium transporter
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
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PLM3_127_b2_sep16_scaffold_3575_6
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria
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Not on your lists |
comp(5824..6393)
----------------- DNA (570bp) protein (190aa) |
kdpC; P-type ATPase subunit high-affinity potassium transport system subunit C (EC:3.6.3.9)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Potassium-transporting ATPase C chain Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJR2_9BACT
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PLM3_127_b2_sep16_scaffold_3575_7
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(6409..8478)
----------------- DNA (2070bp) protein (690aa) |
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
kdpB; K+-transporting ATPase subunit B (EC:3.6.3.12)
potassium-transporting ATPase subunit B Tax=Methylococcus capsulatus RepID=UPI0002D86919
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PLM3_127_b2_sep16_scaffold_3575_8
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria
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Not on your lists |
comp(8489..10294)
----------------- DNA (1806bp) protein (602aa) |
kdpA; high-affinity potassium transport system P-type ATPase, , A chain (EC:3.6.3.9)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Potassium-transporting ATPase A chain Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJC7_9BACT
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PLM3_127_b2_sep16_scaffold_3575_9
unknown
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Not on your lists |
comp(10291..10383)
----------------- DNA (93bp) protein (31aa) |
This feature has no annotations |
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PLM3_127_b2_sep16_scaffold_3575_10
unknown
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Not on your lists |
comp(10393..10515)
----------------- DNA (123bp) protein (41aa) |
This feature has no annotations |
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PLM3_127_b2_sep16_scaffold_3575_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria
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Not on your lists |
comp(10654..11160)
----------------- DNA (507bp) protein (169aa) |
CBS domain containing membrane protein bin=GWC2_Methylomirabilis_70_16 species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
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PLM3_127_b2_sep16_scaffold_3575_12
unknown
|
Not on your lists |
comp(11697..11918)
----------------- DNA (222bp) protein (74aa) |
This feature has no annotations |
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PLM3_127_b2_sep16_scaffold_3575_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria
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Not on your lists |
12205..12594
----------------- DNA (390bp) protein (130aa) |
pcaC; protein PcaC (EC:4.1.1.44)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
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PLM3_127_b2_sep16_scaffold_3575_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
12582..13361
----------------- DNA (780bp) protein (260aa) |
histidinol-phosphate phosphatase, putative bin=GWA2_Methylomirabilis_73_35 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
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PLM3_127_b2_sep16_scaffold_3575_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
13798..14307
----------------- DNA (510bp) protein (170aa) |
Putative Glycosyl transferase, family 9 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative glycosyl transferase
Tax=GWA2_Rokubacteria_73_35_curated
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PLM3_127_b2_sep16_scaffold_3575_16
unknown
|
Not on your lists |
14304..14489
----------------- DNA (186bp) protein (62aa) |
This feature has no annotations |
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PLM3_127_b2_sep16_scaffold_3575_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria
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Not on your lists |
comp(14536..15603)
----------------- DNA (1068bp) protein (356aa) |
Hydrolase, carbon-nitrogen family bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Providencia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
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PLM3_127_b2_sep16_scaffold_3575_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
16008..17090
----------------- DNA (1083bp) protein (361aa) |
Uroporphyrinogen decarboxylase (URO-D) bin=GWA2_Methylomirabilis_73_35 species=Methanococcus aeolicus genus=Methanococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Uroporphyrinogen decarboxylase (URO-D)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
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PLM3_127_b2_sep16_scaffold_3575_19
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(17134..18900)
----------------- DNA (1767bp) protein (589aa) |
Adenylate/guanylate cyclase Tax=Oceanibaculum indicum P24 RepID=K2J5Q2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:ETW92716.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
adenylate cyclase
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PLM3_127_b2_sep16_scaffold_3575_20
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(18912..19760)
----------------- DNA (849bp) protein (283aa) |
UPI0003A04C7D related cluster Tax=unknown RepID=UPI0003A04C7D
Metallo-beta-lactamase {ECO:0000313|EMBL:GAD21512.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
beta-lactamase domain protein
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PLM3_127_b2_sep16_scaffold_3575_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(19896..21272)
----------------- DNA (1377bp) protein (459aa) |
pyridoxal-phosphate dependent TrpB-like enzyme; K06001 tryptophan synthase beta chain [EC:4.2.1.20] bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
pyridoxal-phosphate dependent TrpB-like enzyme
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
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PLM3_127_b2_sep16_scaffold_3575_22
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria
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Not on your lists |
21450..22676
----------------- DNA (1227bp) protein (409aa) |
Major facilitator superfamily MFS_1 bin=GWC2_Methylomirabilis_70_16 species=Methylobacter tundripaludum genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
sugar phosphate permease
Tax=GWC2_Rokubacteria_70_16_curated
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PLM3_127_b2_sep16_scaffold_3575_23
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
22751..23920
----------------- DNA (1170bp) protein (390aa) |
Putative formyl-coenzyme A transferase Tax=Bradyrhizobium sp. ORS 285 RepID=H0RXB5_9BRAD
L-carnitine dehydratase/bile acid-inducible protein F
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
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PLM3_127_b2_sep16_scaffold_3575_24
Mycobacterium vulneris, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
23938..24903
----------------- DNA (966bp) protein (322aa) |
hypothetical protein Tax=Sciscionella marina RepID=UPI00037F5956
Putative TIM-barrel fold metal-dependent hydrolase {ECO:0000313|EMBL:CDO31206.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium vulneris.;"
putative amidohydrolase
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PLM3_127_b2_sep16_scaffold_3575_25
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria
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Not on your lists |
25182..25979
----------------- DNA (798bp) protein (266aa) |
PHP domain protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TBN5_9CHLR
PHP domain protein {ECO:0000313|EMBL:EFH89817.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
histidinol phosphatase
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PLM3_127_b2_sep16_scaffold_3575_26
unknown
|
Not on your lists |
26020..26289
----------------- DNA (270bp) protein (90aa) |
This feature has no annotations |
|
PLM3_127_b2_sep16_scaffold_3575_27
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria
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Not on your lists |
26279..26533
----------------- DNA (255bp) protein (85aa) |
Tax=RBG_16_Nitrospirae_64_22_curated
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PLM3_127_b2_sep16_scaffold_3575_28
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria
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Not on your lists |
26590..26871
----------------- DNA (282bp) protein (94aa) |
Uncharacterized protein Tax=Plesiocystis pacifica SIR-1 RepID=A6GK59_9DELT
hypothetical protein
Tax=RBG_16_Nitrospirae_64_22_curated
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PLM3_127_b2_sep16_scaffold_3575_29
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria
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Not on your lists |
26874..28475
----------------- DNA (1602bp) protein (534aa) |
Uncharacterized protein Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XK89_DESMR
hypothetical protein
Tax=RBG_16_Nitrospirae_64_22_curated
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PLM3_127_b2_sep16_scaffold_3575_30
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
28472..29359
----------------- DNA (888bp) protein (296aa) |
SSU ribosomal protein S6P modification protein Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31ER3_THICR
putative ribosomal protein S6
Putative ribosomal protein S6 {ECO:0000313|EMBL:CCQ72148.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
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