name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
PLM3_127_b2_sep16_scaffold_7716_1
unknown
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Not on your lists |
3..146
----------------- DNA (144bp) protein (48aa) |
This feature has no annotations |
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PLM3_127_b2_sep16_scaffold_7716_2
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
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Not on your lists |
136..435
----------------- DNA (300bp) protein (100aa) |
Cytochrome c, mono-and diheme variants family Tax=Singulisphaera acidiphila RepID=L0DBX0_SINAD
cytochrome c, mono- and diheme variants family
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
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PLM3_127_b2_sep16_scaffold_7716_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(442..2766)
----------------- DNA (2325bp) protein (775aa) |
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Xanthine dehydrogenase, molybdenum binding subunit apoprotein bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
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PLM3_127_b2_sep16_scaffold_7716_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
2883..3770
----------------- DNA (888bp) protein (296aa) |
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NHL repeat family protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
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PLM3_127_b2_sep16_scaffold_7716_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
3778..4437
----------------- DNA (660bp) protein (220aa) |
Phosphonate degradation operons associated HDIG domain protein Tax=Variovorax paradoxus (strain S110) RepID=C5CPJ5_VARPS
phosphonate degradation operon associated HDIG domain-containing protein
Phosphonate degradation operons associated HDIG domain protein {ECO:0000313|EMBL:ACS17716.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
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PLM3_127_b2_sep16_scaffold_7716_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(4459..5103)
----------------- DNA (645bp) protein (215aa) |
Soluble lytic murein transglycosylase-like protein bin=GWA2_Methylomirabilis_73_35 species=Selenomonas ruminantium genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
slt; soluble lytic transglycosylase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
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PLM3_127_b2_sep16_scaffold_7716_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(5246..5488)
----------------- DNA (243bp) protein (81aa) |
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
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PLM3_127_b2_sep16_scaffold_7716_8
RBG_16_NC10_65_8_curated, NC10, Bacteria
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Not on your lists |
5564..6052
----------------- DNA (489bp) protein (163aa) |
Putative O-linked N-acetylglucosamine transferase, SPINDLY family Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y7E8_THIV6
Flp pilus assembly protein TadD
Tax=RBG_16_NC10_65_8_curated
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PLM3_127_b2_sep16_scaffold_7716_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
6059..7639
----------------- DNA (1581bp) protein (527aa) |
Family 3 adenylate cyclase bin=GWC2_Methylomirabilis_70_16 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
family 3 adenylate cyclase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
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PLM3_127_b2_sep16_scaffold_7716_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
7715..8740
----------------- DNA (1026bp) protein (342aa) |
hypothetical protein bin=bin7_NC10_sister species=Thermus thermophilus genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
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PLM3_127_b2_sep16_scaffold_7716_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
8752..9774
----------------- DNA (1023bp) protein (341aa) |
pyridoxal phosphate-dependent enzyme, D-cysteine desulfhydrase family (EC:3.5.99.7)
D-cysteine desulfhydrase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
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PLM3_127_b2_sep16_scaffold_7716_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
9780..10613
----------------- DNA (834bp) protein (278aa) |
Alpha/beta hydrolase fold protein bin=GWA2_Methylomirabilis_73_35 species=Verrucosispora maris genus=Verrucosispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
branched-chain alpha-keto acid dehydrogenase subunit E2
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
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PLM3_127_b2_sep16_scaffold_7716_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
10630..10947
----------------- DNA (318bp) protein (106aa) |
Rhodanese domain protein bin=GWA2_Methylomirabilis_73_35 species=Kingella denitrificans genus=Kingella taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rhodanese
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
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PLM3_127_b2_sep16_scaffold_7716_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
10948..11727
----------------- DNA (780bp) protein (260aa) |
enoyl-CoA hydratase (EC:4.2.1.17) bin=bin7_NC10_sister species=Saccharopolyspora spinosa genus=Saccharopolyspora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
enoyl-CoA hydratase (EC:4.2.1.17)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
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PLM3_127_b2_sep16_scaffold_7716_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
11875..12399
----------------- DNA (525bp) protein (175aa) |
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase bin=GWA2_Methylomirabilis_73_35 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
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PLM3_127_b2_sep16_scaffold_7716_16
unknown
|
Not on your lists |
12475..12816
----------------- DNA (342bp) protein (114aa) |
This feature has no annotations |
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PLM3_127_b2_sep16_scaffold_7716_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
12882..13733
----------------- DNA (852bp) protein (284aa) |
3-hydroxybutyryl-CoA dehydrogenase; K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] bin=bin7_NC10_sister species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
3-hydroxybutyryl-CoA dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
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PLM3_127_b2_sep16_scaffold_7716_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
13878..14606
----------------- DNA (729bp) protein (243aa) |
Transcriptional regulator, GntR family bin=GWC2_Methylomirabilis_70_16 species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
GntR family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
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PLM3_127_b2_sep16_scaffold_7716_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
14644..16740
----------------- DNA (2097bp) protein (699aa) |
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
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PLM3_127_b2_sep16_scaffold_7716_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria
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Not on your lists |
17216..17434
----------------- DNA (219bp) protein (73aa) |
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
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PLM3_127_b2_sep16_scaffold_7716_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
17467..19641
----------------- DNA (2175bp) protein (725aa) |
5-oxoprolinase; K01474 N-methylhydantoinase B [EC:3.5.2.14] bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
5-oxoprolinase (EC:3.5.2.9)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
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PLM3_127_b2_sep16_scaffold_7716_22
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria
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Not on your lists |
19649..20365
----------------- DNA (717bp) protein (239aa) |
Acyl-CoA dehydrogenase domain protein bin=GWC2_Methylomirabilis_70_16 species=Magnetospirillum sp. SO-1 genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acyl-CoA dehydrogenase domain protein
Tax=GWC2_Rokubacteria_70_16_curated
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PLM3_127_b2_sep16_scaffold_7716_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
20391..21560
----------------- DNA (1170bp) protein (390aa) |
Propanoyl-CoA C-acyltransferase bin=GWC2_Methylomirabilis_70_16 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acetyl-CoA acetyltransferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
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PLM3_127_b2_sep16_scaffold_7716_24
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria
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Not on your lists |
21617..22828
----------------- DNA (1212bp) protein (404aa) |
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] bin=bin8_Chloro species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
Tax=CSP1_4_Chloroflexi
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PLM3_127_b2_sep16_scaffold_7716_25
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
22842..23270
----------------- DNA (429bp) protein (143aa) |
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative nucleic-acid-binding protein containing a Zn-ribbon
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
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PLM3_127_b2_sep16_scaffold_7716_26
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
23267..23650
----------------- DNA (384bp) protein (128aa) |
Cobalamin B12-binding domain protein bin=GWA2_Methylomirabilis_73_35 species=Thermotoga lettingae genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cobalamin B12-binding domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
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PLM3_127_b2_sep16_scaffold_7716_27
R_Rokubacteria_71_18, Rokubacteria, Bacteria
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Not on your lists |
23647..25221
----------------- DNA (1575bp) protein (525aa) |
methylmalonyl-CoA mutase, large subunit (EC:5.4.99.2); K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] bin=bin7_NC10_sister species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
methylmalonyl-CoA mutase, large subunit (EC:5.4.99.2)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
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PLM3_127_b2_sep16_scaffold_7716_28
CSP1_6_Rokubacteria, Rokubacteria, Bacteria
|
Not on your lists |
25218..25472
----------------- DNA (255bp) protein (85aa) |
hypothetical protein; K01989 putative ABC transport system substrate-binding protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
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PLM3_127_b2_sep16_scaffold_7716_29
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
25472..25660
----------------- DNA (189bp) protein (63aa) |
hypothetical protein; K01989 putative ABC transport system substrate-binding protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
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PLM3_127_b2_sep16_scaffold_7716_30
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26174..27100
----------------- DNA (927bp) protein (309aa) |
SMP-30/Gluconolaconase/LRE domain protein Tax=beta proteobacterium CB RepID=M1SU42_9PROT
SMP-30/Gluconolaconase/LRE domain protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
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