ggKbase home page

PLM3_127_b2_sep16_scaffold_12368

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_12368_1
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43..1005)
-----------------
DNA (963bp)
protein (321aa)
GDP-L-fucose synthase Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0IJX1_THETR
nucleoside-diphosphate-sugar epimerase
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
PLM3_127_b2_sep16_scaffold_12368_2
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1012..1989)
-----------------
DNA (978bp)
protein (326aa)
GDP-mannose 4,6-dehydratase (EC:4.2.1.47)
GDP-mannose 4,6-dehydratase bin=GWC2_Deltaproteobacteria_55_46 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
Tax=GWC2_Deltaproteobacteria_55_46b_curated
PLM3_127_b2_sep16_scaffold_12368_3
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(2091..3080)
-----------------
DNA (990bp)
protein (330aa)
NAD-dependent epimerase/dehydratase bin=GWA2_Elusimicrobia_69_24 species=Paenibacillus mucilaginosus genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
NAD-dependent epimerase/dehydratase
Tax=GWA2_Elusimicrobia_69_24_curated
PLM3_127_b2_sep16_scaffold_12368_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3160..3588)
-----------------
DNA (429bp)
protein (143aa)
Uncharacterized protein bin=GWA2_Elusimicrobia_69_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_12368_5
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(3740..4561)
-----------------
DNA (822bp)
protein (274aa)
Binding-protein-dependent transport systems inner membrane component bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
ABC transporter permease
Tax=GWA2_Elusimicrobia_69_24_curated
PLM3_127_b2_sep16_scaffold_12368_6
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(4558..4875)
-----------------
DNA (318bp)
protein (106aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component bin=GWA2_Elusimicrobia_69_24 species=Rhizobium sp. CF080 genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
peptide ABC transporter permease
Tax=GWA2_Elusimicrobia_69_24_curated
PLM3_127_b2_sep16_scaffold_12368_7
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(4839..6962)
-----------------
DNA (2124bp)
protein (708aa)
ABC-type dipeptide transport system, periplasmic component bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
ABC-type dipeptide transport system, periplasmic component
Tax=GWA2_Elusimicrobia_69_24_curated
PLM3_127_b2_sep16_scaffold_12368_8
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(6962..7360)
-----------------
DNA (399bp)
protein (133aa)
NAD-dependent epimerase/dehydratase bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
UDP-glucose 4-epimerase
Tax=GWA2_Elusimicrobia_69_24_curated
Displaying 8 items

View Taxonomy