ggKbase home page

PLM3_127_b2_sep16_scaffold_947_7

Organism: PLM3_127_b2_sep16_Rokubacteria_69_9

near complete RP 51 / 55 MC: 3 BSCG 50 / 51 ASCG 12 / 38 MC: 1
Location: 4889..5947

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-E factor bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 352.0
  • Bit_score: 423
  • Evalue 1.30e-115
RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 45.0
  • Coverage: 189.0
  • Bit_score: 154
  • Evalue 3.10e-35
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.2
  • Coverage: 346.0
  • Bit_score: 427
  • Evalue 9.30e-117

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1059
GTGAGCCCCGACGATCGGCTCCTGGTGGAGCGCTGTCAAGCTGGGGACCTGTCCGCGTTCGAGCCGCTGGTCGAGAAGTATCGGCAGCGCGTCTGGCGGCTGGCCTATAACGTGCTGCGCGATCGCGAGGAGGCCTGGGATGTTGCCCAGGATGCGTTCATCCGAGCGTACCAGGCCCTCCCGTCGTTTCGTGGACAGTCAGCGTTCTATACGTGGTTGTTCCGCATCGTGATGAATCTCGCGGCCGATCGCGCCCGGCAGCGGGCGGCGCGCGGGCGTGCGTTCGGTACGGAGCGGGTTCCGGAGGAGGATTGGGAGCGGCTGATGGCGGATCAGAGCGCGGCGCCCGACAGTTCGGCGGCGCAGACGGAAGATCGGGAGCGGATCACGAGGGCGCTCGACACGTTGTCGGAGGATCATCGAGCGATTATCATGCTCAGTGATGTCGAAGGGTTGGCGTATCGGGAGATCGCCGAGGTGCTCGACGTCCCGATCGGGACGGTGATGTCGCGGCTGCACAACGCGCGAAAGCGGCTGCGCCAGGCGCTGAAGCCGCTTCTGGCGGCCGTGATCGTCGTGTTGCTGGCCTGGACGGCGGGCCCGGTGTCTGCCCAAGGACCTCCCGCGGCGCCGTCGCCGGGGGTGCCGTCCTCCGTCATGGTGCATTTCGGTGCGCGCGTGTACCTCGCCACCGACGGGCCAGCCCCCTTGAACCCGCCAGATCTCCCGAGCGAGCCGCGGGTGGAGCGGTACGTGCTGAAGCTCCGGCAGCTCTTCCGGTACCAGCAGTACCATCCTCTGCAGCAGGTCGGCGCCGAGGTCCCGGTGGGGGTCACGCACCGCGCGGTACTGGCCGGGGACCGTCAACTGGAGCTGACCCCCGAGGGGATGGCGCAGAGGGCGGTGCGCTTGCGCGTGCGGCTGGTGCGGGGCAACATCACCGAGCTGACGACCAATCTGGAGGCCCCTGCCGGGGCGGCCACGATCATCGGCGGACCGCGCCACGGGGACGGGGTGCTCATCATTCTCCTCTGGGCCAGTCCCAATCCCCCCCGCTGA
PROTEIN sequence
Length: 353
VSPDDRLLVERCQAGDLSAFEPLVEKYRQRVWRLAYNVLRDREEAWDVAQDAFIRAYQALPSFRGQSAFYTWLFRIVMNLAADRARQRAARGRAFGTERVPEEDWERLMADQSAAPDSSAAQTEDRERITRALDTLSEDHRAIIMLSDVEGLAYREIAEVLDVPIGTVMSRLHNARKRLRQALKPLLAAVIVVLLAWTAGPVSAQGPPAAPSPGVPSSVMVHFGARVYLATDGPAPLNPPDLPSEPRVERYVLKLRQLFRYQQYHPLQQVGAEVPVGVTHRAVLAGDRQLELTPEGMAQRAVRLRVRLVRGNITELTTNLEAPAGAATIIGGPRHGDGVLIILLWASPNPPR*