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PLM3_127_b2_sep16_scaffold_1599_21

Organism: PLM3_127_b2_sep16_Rokubacteria_69_9

near complete RP 51 / 55 MC: 3 BSCG 50 / 51 ASCG 12 / 38 MC: 1
Location: 20337..20861

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=bin5_DeltaP species=Nitrospina sp. SCGC AAA288-L16 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin5_DeltaP organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 47.1
  • Coverage: 172.0
  • Bit_score: 154
  • Evalue 5.40e-35
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 174.0
  • Bit_score: 135
  • Evalue 9.50e-30
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 170.0
  • Bit_score: 248
  • Evalue 5.00e-63

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 525
ATGGAGGCGTTCGCGCCCCGCGTCTACCGCCTCGCCCACGGTGTCACCCGGAACCCCGCCGACGCCGAAGAAGTCGTCCAGGACGTCTTCCTCACGGTGACCCGCAAGATCGGAGACTTCGAGGGGCGATCGGCGCTGAGCACCTGGATCTACCGGATCACGATGAACACCGCGCTGAACAAGCGGCGGGGAAAGCGATCCGAAGTCGAGGTGTCCCTGGAAGAGCACTTGCCGAGGTTCAAGGAGGACGGTCATCGGGAAGGGGATCGCACCTTTCTCCTCGCCGACTGGTCCCAGACCCCGGAGGAGGAGTTGCTTTCCGAGGAAGGCCGCGCCGCCGTGAATCGCGCGATCGAGGCCTTACCCGCCCACTACCGGGCCGTCCTCATCCTGCGCGACGTCGAGGGCGTGTCCAACGAGGAGGCGGGCGAGGTGCTCGGCGAATCCGTCGCCTCGGTGAAGTCGCGCCTGCACCGCGCGCGCATGGCGCTCCGCGAACAGCTCACGCGGTTCTTCGCGCCCTGA
PROTEIN sequence
Length: 175
MEAFAPRVYRLAHGVTRNPADAEEVVQDVFLTVTRKIGDFEGRSALSTWIYRITMNTALNKRRGKRSEVEVSLEEHLPRFKEDGHREGDRTFLLADWSQTPEEELLSEEGRAAVNRAIEALPAHYRAVLILRDVEGVSNEEAGEVLGESVASVKSRLHRARMALREQLTRFFAP*