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PLM3_127_b2_sep16_scaffold_1599

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_1599_1
Leptospira yanagawae, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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1..1677
-----------------
DNA (1677bp)
protein (559aa)
Adenylate/guanylate cyclase catalytic domain protein Tax=Leptospira yanagawae serovar Saopaulo str. Sao Paulo = ATCC 700523 RepID=R9A074_9LEPT
Adenylate/guanylate cyclase catalytic domain protein {ECO:0000313|EMBL:EOQ89733.1}; species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira yanagawae serovar Saopaulo str. Sao Paulo = ATCC 700523.;"
adenylate/guanylate cyclase with integral membrane sensor
PLM3_127_b2_sep16_scaffold_1599_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(1761..2663)
-----------------
DNA (903bp)
protein (301aa)
N-carbamyl-D-amino acid amidohydrolase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
N-carbamoyl-D-amino acid hydrolase
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_1599_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(2766..4187)
-----------------
DNA (1422bp)
protein (474aa)
hyuA; dihydropyrimidinase (EC:3.5.2.2)
D-Hydantoinase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_1599_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(4247..4747)
-----------------
DNA (501bp)
protein (167aa)
acetyltransferase (EC:2.3.1.-)
Putative acetyltransferase protein bin=GWC2_Methylomirabilis_70_24 species=Hydrocarboniphaga effusa genus=Hydrocarboniphaga taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_1599_5
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

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4858..5667
-----------------
DNA (810bp)
protein (270aa)
Hydrolase, alpha/beta fold family bin=GWC2_Methylomirabilis_70_16 species=Pseudomonas putida genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hydrolase, alpha/beta fold family protein
Tax=GWA2_Elusimicrobia_69_24_curated
PLM3_127_b2_sep16_scaffold_1599_6
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

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6054..6800
-----------------
DNA (747bp)
protein (249aa)
Transcriptional regulator, GntR family Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11D72_MESSB
GntR family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_1599_7
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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6977..7465
-----------------
DNA (489bp)
protein (163aa)
hypothetical protein Tax=Deinococcus apachensis RepID=UPI000369A481
Uncharacterized protein {ECO:0000313|EMBL:CCF84733.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1599_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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7592..8137
-----------------
DNA (546bp)
protein (182aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
Putative branched-chain amino acid ABC transporter, ATP-binding protein bin=GWF2_Methylomirabilis_70_14 species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_1599_9
unknown

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8150..8263
-----------------
DNA (114bp)
protein (38aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1599_10
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(8254..8967)
-----------------
DNA (714bp)
protein (238aa)
GCN5-related N-acetyltransferase Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PLP1_MEIRD
N-acetyltransferase GCN5
N-acetyltransferase GCN5 {ECO:0000313|EMBL:AGK05417.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21); (Thermus ruber).;"
PLM3_127_b2_sep16_scaffold_1599_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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9061..10554
-----------------
DNA (1494bp)
protein (498aa)
Transcriptional regulator, GntR family bin=GWC2_Methylomirabilis_70_16 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
GntR family transcriptional regulator
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_1599_12
Mycobacterium arupense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11312..12439
-----------------
DNA (1128bp)
protein (376aa)
Uncharacterized protein Tax=Nostoc sp. PCC 7107 RepID=K9QAZ0_9NOSO
Uncharacterized protein {ECO:0000313|EMBL:KKC00492.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium terrae complex.;" source="Mycobacterium arupense.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1599_13
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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12447..12914
-----------------
DNA (468bp)
protein (156aa)
Uncharacterized protein Tax=Nostoc sp. PCC 7107 RepID=K9Q9E4_9NOSO
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3_127_b2_sep16_scaffold_1599_14
unknown

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comp(12952..13131)
-----------------
DNA (180bp)
protein (60aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1599_15
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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13451..14926
-----------------
DNA (1476bp)
protein (492aa)
Possible trehalose/maltose binding protein Tax=Roseobacter sp. SK209-2-6 RepID=A4ES34_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:ETW92856.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family
PLM3_127_b2_sep16_scaffold_1599_16
RLO_Entotheonella_69_37, Entotheonella, Bacteria

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14940..15902
-----------------
DNA (963bp)
protein (321aa)
Binding-protein-dependent transport systems inner membrane component Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQ18_9RHIZ
binding-protein-dependent transporter inner membrane component
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
PLM3_127_b2_sep16_scaffold_1599_17
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

15899..16738
-----------------
DNA (840bp)
protein (280aa)
Putative sugar ABC transporter, permease protein Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N9Y9_RHOPA
sugar ABC transporter permease
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
PLM3_127_b2_sep16_scaffold_1599_18
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

16735..17808
-----------------
DNA (1074bp)
protein (358aa)
ABC transporter-like protein (EC:3.6.3.-)
ABC transporter related Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LID8_DINSH
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
PLM3_127_b2_sep16_scaffold_1599_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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17822..19291
-----------------
DNA (1470bp)
protein (490aa)
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Tax=Pelagibacter sp. (strain IMCC9063) RepID=F2I1V9_PELSM
succinate dehydrogenase/fumarate reductase, flavoprotein subunit
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_1599_20
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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19384..20253
-----------------
DNA (870bp)
protein (290aa)
Isocitrate lyase and phosphorylmutase Tax=Spiribacter salinus M19-40 RepID=R4V2C8_9GAMM
Isocitrate lyase {ECO:0000313|EMBL:KJB93520.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
isocitrate lyase and phosphorylmutase
PLM3_127_b2_sep16_scaffold_1599_21
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

20337..20861
-----------------
DNA (525bp)
protein (175aa)
RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=bin5_DeltaP species=Nitrospina sp. SCGC AAA288-L16 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin5_DeltaP organism_group=Deltaproteobacteria
RNA polymerase ECF-type sigma factor
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_1599_22
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20958..21245)
-----------------
DNA (288bp)
protein (96aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW97051.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
id=1956518 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
PLM3_127_b2_sep16_scaffold_1599_23
unknown

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comp(21242..21346)
-----------------
DNA (105bp)
protein (35aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1599_24
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(21468..21656)
-----------------
DNA (189bp)
protein (63aa)
Peroxiredoxin bin=GWA2_Methylomirabilis_73_35 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Peroxiredoxin
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Displaying 24 items

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