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PLM3_127_b2_sep16_scaffold_5827

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_5827_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(266..733)
DNA (468bp) protein (156aa)
Ribonuclease VapC Tax=Thiothrix nivea DSM 5205 RepID=I3BSF1_9GAMM
PIN domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_5827_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(675..935)
DNA (261bp) protein (87aa)
Transcriptional regulator, CopG family Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CX08_TRURR
CopG family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_5827_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(1078..2001)
DNA (924bp) protein (308aa)
hypothetical protein; K06889 bin=bin1_lowGC species=Thermosipho africanus genus=Thermosipho taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_5827_4
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(2004..2927)
DNA (924bp) protein (308aa)
id=14424765 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_5827_5
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(2960..4309)
DNA (1350bp) protein (450aa)
glycoside hydrolase family protein bin=bin1_lowGC species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
glycoside hydrolase family protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_5827_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(4333..4776)
DNA (444bp) protein (148aa)
UspA domain-containing protein bin=bin1_lowGC species=Desulfurobacterium sp. TC5-1 genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=bin1_lowGC organism_group=Unknown_CP
UspA domain-containing protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_5827_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(4906..5964)
DNA (1059bp) protein (353aa)
alcohol dehydrogenase bin=bin1_lowGC species=Oxalobacter formigenes genus=Oxalobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
alcohol dehydrogenase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_5827_8
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

6236..6499
DNA (264bp) protein (88aa)
id=14424398 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_5827_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(6402..7964)
DNA (1563bp) protein (521aa)
gntK; APH family phosphotransferase fused to gluconate kinase family enzyme; K07028 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Verrucomicrobia tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_5827_10
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(8187..8390)
DNA (204bp) protein (68aa)
potassium uptake protein, TrkA family bin=bin1_lowGC species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin1_lowGC organism_group=Unknown_CP
TrkA domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_5827_11
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(8530..9441)
DNA (912bp) protein (304aa)
universal stress protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=bin1_lowGC organism_group=Unknown_CP
universal stress protein UspA-like protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_5827_12
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(9493..10377)
DNA (885bp) protein (295aa)
universal stress protein uspa-like protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=bin1_lowGC organism_group=Unknown_CP
UspA domain protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_5827_13
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(10491..10946)
DNA (456bp) protein (152aa)
heat shock protein, Hsp20 family; K13993 HSP20 family protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin1_lowGC organism_group=Unknown_CP
Hsp20 family heat shock protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_5827_14
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(11138..11623)
DNA (486bp) protein (162aa)
hypothetical protein; K09129 hypothetical protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_5827_15
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

11756..12787
DNA (1032bp) protein (344aa)
alcohol dehydrogenase (EC:1.1.1.1)
alcohol dehydrogenase Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B516C3
Zinc-binding alcohol dehydrogenase family protein {ECO:0000313|EMBL:GAN33269.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
PLM3_127_b2_sep16_scaffold_5827_16
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

Not on your lists

comp(12784..13833)
DNA (1050bp) protein (350aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH 4 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=FTSH4_SPHTD
Tax=RBG_16_Zixibacteria_50_21_curated
PLM3_127_b2_sep16_scaffold_5827_17
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

Not on your lists

comp(13910..14746)
DNA (837bp) protein (279aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH 4 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=FTSH4_SPHTD
Tax=RBG_16_Zixibacteria_50_21_curated
PLM3_127_b2_sep16_scaffold_5827_18
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

15042..15626
DNA (585bp) protein (195aa)
GCN5-related N-acetyltransferase bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
GCN5-like N-acetyltransferaser
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_5827_19
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

15700..17562
DNA (1863bp) protein (621aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-); K00936 [EC:2.7.3.-] bin=bin1_lowGC species=Leptospira fainei genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_5827_20
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

17565..18905
DNA (1341bp) protein (447aa)
two component sigma54 specific Fis family transcriptional regulator bin=bin1_lowGC species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin1_lowGC organism_group=Unknown_CP
sigma-54 dependent transcriptional regulator/response regulator
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_5827_21
GWC1_OP11_37_12b, Microgenomates, Bacteria

Not on your lists

19100..19798
DNA (699bp) protein (233aa)
hypothetical protein Tax=Methylobacter marinus RepID=UPI00037EBF4E
Uncharacterized protein {ECO:0000313|EMBL:KKQ26403.1}; species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC1_37_12b.;"
ABC transporter ATP-binding protein
PLM3_127_b2_sep16_scaffold_5827_22
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

19800..20558
DNA (759bp) protein (253aa)
ABC-3 protein Tax=Legionella drancourtii LLAP12 RepID=G9ELH5_9GAMM
ABC transporter permease
Tax=CG_CPR10_01
PLM3_127_b2_sep16_scaffold_5827_23

Not on your lists

20597..22171
DNA (1575bp) protein (525aa)
NAD(P)H-hydrate epimerase Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B7341C
Marine sediment metagenome DNA, contig: S03H2_C00233 {ECO:0000313|EMBL:GAH29256.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
kinase
PLM3_127_b2_sep16_scaffold_5827_24
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(22260..22433)
DNA (174bp) protein (58aa)
anti-sigma H sporulation factor LonB (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] bin=bin1_lowGC species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
Displaying 24 items

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