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PLM3_127_b2_sep16_scaffold_2188

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_2188_1
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

309..812
DNA (504bp) protein (168aa)
sodium:proton antiporter Tax=Leucothrix mucor RepID=UPI0003B71D1F
NhaP-type Na+(K+)/H+ antiporter
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_2188_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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809..3052
DNA (2244bp) protein (748aa)
multidrug resistance protein; K15547 multidrug resistance protein MdtO bin=bin1_lowGC species=Serratia fonticola genus=Serratia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
fusaric acid resistance protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2188_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

3049..4158
DNA (1110bp) protein (370aa)
Multidrug resistance efflux pump (EC:1.1.1.42) bin=bin1_lowGC species=Pseudomonas fluorescens genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
RND family efflux transporter protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2188_4
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

4366..6615
DNA (2250bp) protein (750aa)
hypothetical protein Tax=Marinobacterium rhizophilum RepID=UPI000375C77A
cation transport ATPase
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_2188_5
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

6627..6992
DNA (366bp) protein (122aa)
hypothetical protein Tax=Hahella ganghwensis RepID=UPI00036F0E71
likely secreted protein containing plastocyanin domain
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_2188_6
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(7317..8609)
DNA (1293bp) protein (431aa)
yumB1; NADH dehydrogenase; K03885 NADH dehydrogenase [EC:1.6.99.3] bin=bin1_lowGC species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain protein
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_2188_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(8668..10128)
DNA (1461bp) protein (487aa)
glycine betaine aldehyde dehydrogenase bin=bin1_lowGC species=Bacillus sp. L1(2012) genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
glycine betaine aldehyde dehydrogenase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2188_8
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(10177..11697)
DNA (1521bp) protein (507aa)
peptidase S1C, Do; K01362 [EC:3.4.21.-] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
serine protease
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2188_9
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(11843..12553)
DNA (711bp) protein (237aa)
Kynurenine formamidase (EC:3.5.1.9)
Kynurenine formamidase {ECO:0000313|EMBL:AFZ33794.1}; EC=3.5.1.9 {ECO:0000313|EMBL:AFZ33794.1};; species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437).;"
Kynurenine formamidase Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XNY5_STAC7
PLM3_127_b2_sep16_scaffold_2188_10
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(12796..13278)
DNA (483bp) protein (161aa)
aroK; shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71] bin=bin1_lowGC species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin1_lowGC organism_group=Unknown_CP
aroK; shikimate kinase (EC:2.7.1.71)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2188_11
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(13630..13998)
DNA (369bp) protein (123aa)
riboflavin synthase subunit alpha; K00793 riboflavin synthase [EC:2.5.1.9] bin=bin1_lowGC species=Frateuria aurantia genus=Frateuria taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
riboflavin synthase alpha chain (EC:2.5.1.9)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2188_12
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(14001..14486)
DNA (486bp) protein (162aa)
lipoprotein signal peptidase (EC:3.4.23.36); K03101 signal peptidase II [EC:3.4.23.36] bin=bin1_lowGC species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
lspA; lipoprotein signal peptidase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2188_13
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(14812..16875)
DNA (2064bp) protein (688aa)
hypothetical protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2188_14
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(17049..17834)
DNA (786bp) protein (262aa)
TonB family protein bin=bin1_lowGC species=Methyloglobulus morosus genus=Methyloglobulus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
TonB-like protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2188_15
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(18233..19021)
DNA (789bp) protein (263aa)
hypothetical protein bin=bin1_lowGC species=Pontibacter roseus genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2188_16
R_Planctomycetes_38_41, Planctomycetes, Bacteria

Not on your lists

comp(19598..19792)
DNA (195bp) protein (65aa)
UPF0060 membrane protein kuste4632 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q5W3_9BACT
UPF0060 membrane protein ynfA
Tax=RIFCSPHIGHO2_02_FULL_Planctomycetes_38_41_curated
Displaying 16 items

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