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PLM3_127_b2_sep16_scaffold_2996

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_2996_1
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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3..1037
DNA (1035bp) protein (345aa)
phenylalanyl-tRNA synthetase, alpha subunit; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] bin=bin1_lowGC species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
phenylalanyl-tRNA synthetase subunit alpha
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2996_2
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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1125..1436
DNA (312bp) protein (104aa)
Uncharacterized conserved protein containing predicted Zn-ribbon like domain Tax=delta proteobacterium MLMS-1 RepID=Q1NNK9_9DELT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3_127_b2_sep16_scaffold_2996_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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1633..2187
DNA (555bp) protein (185aa)
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13); K01494 dCTP deaminase [EC:3.5.4.13] bin=bin1_lowGC species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2996_4
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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2354..4819
DNA (2466bp) protein (822aa)
DNA gyrase subunit B (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] bin=bin1_lowGC species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
DNA gyrase subunit B (EC:5.99.1.3)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2996_5
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(4863..5282)
DNA (420bp) protein (140aa)
esterase bin=bin1_lowGC species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
esterase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2996_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(5561..6622)
DNA (1062bp) protein (354aa)
Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase-related flavin-dependent oxidoreductase bin=bin1_lowGC species=Archaeoglobus sulfaticallidus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=bin1_lowGC organism_group=Unknown_CP
Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase-related flavin-dependent oxidoreductase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2996_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

6755..6979
DNA (225bp) protein (75aa)
id=14425045 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2996_trna_1
unknown

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7056..7127
DNA (72bp)
transferRNA Val
PLM3_127_b2_sep16_scaffold_2996_8
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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comp(7206..8630)
DNA (1425bp) protein (475aa)
id=14426087 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_2996_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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8813..9130
DNA (318bp) protein (106aa)
GYD family protein bin=bin1_lowGC species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
GYD domain superfamily
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2996_10
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

9520..11325
DNA (1806bp) protein (602aa)
mutL; DNA mismatch repair protein; K03572 DNA mismatch repair protein MutL bin=bin1_lowGC species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
mutL; DNA mismatch repair protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2996_11
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

11329..11916
DNA (588bp) protein (196aa)
phosphoheptose isomerase (EC:5.3.1.-)
sugar isomerase (SIS) bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2996_12
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

12203..12514
DNA (312bp) protein (104aa)
translation elongation factor P; K02356 elongation factor P bin=bin1_lowGC species=Thermodesulfatator atlanticus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin1_lowGC organism_group=Unknown_CP
efp; translation elongation factor P
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2996_13
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

12574..12774
DNA (201bp) protein (67aa)
translation elongation factor P; K02356 elongation factor P bin=bin1_lowGC species=Thermodesulfatator atlanticus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin1_lowGC organism_group=Unknown_CP
translation elongation factor P (EF-P)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2996_14
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

12860..15571
DNA (2712bp) protein (904aa)
hypothetical protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_2996_15
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

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15640..15987
DNA (348bp) protein (116aa)
Glycoside hydrolase, family 13-like protein Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZVV1_DESOH
glycoside hydrolase family protein
Tax=RBG_16_Nitrospirae_43_8_curated
PLM3_127_b2_sep16_scaffold_2996_16
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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16273..18213
DNA (1941bp) protein (647aa)
1,4-alpha-glucan branching enzyme GlgB Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q1D9_9BACT
glycogen branching protein
Tax=CG_Desulfob_01
PLM3_127_b2_sep16_scaffold_2996_17
GWA2_Nitrospirae_42_11_curated, Nitrospirae, Bacteria

Not on your lists

18301..18579
DNA (279bp) protein (93aa)
Calcium/proton exchanger (Cax) Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I7S0_METCZ
calcium/proton exchanger (cax)
Tax=GWA2_Nitrospirae_42_11_curated
Displaying 18 items

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