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PLM3_127_b2_sep16_scaffold_6436

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_6436_1
unknown

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comp(81..446)
DNA (366bp) protein (122aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_6436_2
Synechococcus sp. PCC 7002, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(547..888)
DNA (342bp) protein (114aa)
Thioredoxin Tax=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) RepID=B1XNS9_SYNP2
trx; thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum; quadruplicatum).;"
PLM3_127_b2_sep16_scaffold_6436_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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1081..1782
DNA (702bp) protein (234aa)
lon3; ATP-dependent protease La; K07157 bin=bin1_lowGC species=Nitrospina sp. SCGC AAA288-L16 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin1_lowGC organism_group=Unknown_CP
putative peptidase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_6436_4
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(1899..2690)
DNA (792bp) protein (264aa)
alpha/beta fold family hydrolase bin=bin1_lowGC species=Bacillus bataviensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
alpha/beta fold family hydrolase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_6436_5
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(2878..3324)
DNA (447bp) protein (149aa)
Holliday junction resolvase YqgF; K07447 putative holliday junction resolvase [EC:3.1.-.-] bin=bin1_lowGC species=Clostridium intestinale genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
putative holliday junction resolvase (EC:3.1.-.-)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_6436_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(3510..4133)
DNA (624bp) protein (208aa)
hypothetical protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_6436_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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4721..7156
DNA (2436bp) protein (812aa)
nrdJ1; ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] bin=bin1_lowGC species=unknown genus=unknown taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=bin1_lowGC organism_group=Unknown_CP
nrdJ1; ribonucleoside-diphosphate reductase (EC:1.17.4.1)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_6436_8
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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comp(7178..7321)
DNA (144bp) protein (48aa)
RNA polymerase, sigma 70 subunit, RpoD subfamily; K03086 RNA polymerase primary sigma factor bin=bin1_lowGC species=Oscillibacter sp. CAG:155 genus=Oscillibacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
rpoD; RNA polymerase sigma-70 factor
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
Displaying 8 items

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