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PLM3_127_b2_sep16_scaffold_4162

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_4162_1
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(1..573)
DNA (573bp) protein (191aa)
hypothetical protein; K15270 S-adenosylmethionine uptake transporter bin=bin1_lowGC species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_4162_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

1029..1295
DNA (267bp) protein (89aa)
DNA polymerase beta domain-containing protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=bin1_lowGC organism_group=Unknown_CP
DNA polymerase beta domain-containing protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_4162_3
Desulfonatronum thiodismutans, Desulfonatronum, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1391..1729)
DNA (339bp) protein (113aa)
mRNA interferase Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0N8L2_DESTT
Elongation factor GreAB {ECO:0000313|EMBL:AIE19542.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfonatronumaceae; Desulfonatronum.;" source="Desulfonatronum thiodismutans.;"
PemK-like protein
PLM3_127_b2_sep16_scaffold_4162_4
RBG_16_Planctomycetes_41_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(1719..1952)
DNA (234bp) protein (78aa)
Conserved uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=RBG_16_Planctomycetes_41_13_curated
PLM3_127_b2_sep16_scaffold_4162_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2048..2539)
DNA (492bp) protein (164aa)
hypothetical protein
Putative uncharacterized protein bin=GWA2_OP3_52_12 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_127_b2_sep16_scaffold_4162_6
unknown

Not on your lists

2794..2964
DNA (171bp) protein (57aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4162_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

3260..4399
DNA (1140bp) protein (380aa)
hypothetical protein; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13] bin=bin1_lowGC species=Desulfitobacterium metallireducens genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
DEAD/DEAH box helicase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_4162_8
GWF2_Planctomycetes_40_8_curated, Planctomycetes, Bacteria

Not on your lists

4547..4870
DNA (324bp) protein (108aa)
Uncharacterized protein Tax=Alishewanella RepID=H3ZIB6_9ALTE
DnaK suppressor protein
Tax=GWF2_Planctomycetes_40_8_curated
PLM3_127_b2_sep16_scaffold_4162_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(4908..7133)
DNA (2226bp) protein (742aa)
sulfite reductase, contains SirA-like domain bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
sulfite reductase, contains SirA-like domain
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_4162_10
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

7627..7938
DNA (312bp) protein (104aa)
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_4162_11
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

7964..8173
DNA (210bp) protein (70aa)
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_4162_12
unknown

Not on your lists

comp(8250..8450)
DNA (201bp) protein (67aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4162_13
Cyanobacterium aponinum, Cyanobacterium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

8642..9406
DNA (765bp) protein (255aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AFZ53672.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AFZ53672.1};; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobacterium.;" source="Cyanobacterium aponinum (strain PCC 10605).;"
3-ketoacyl-ACP reductase Tax=Fischerella muscicola RepID=UPI0002D5C505
PLM3_127_b2_sep16_scaffold_4162_14
Vulcanisaeta distributa, Vulcanisaeta, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

9403..10038
DNA (636bp) protein (212aa)
Queuosine synthesis Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QNH2_VULDI
Queuosine synthesis
Queuosine synthesis {ECO:0000313|EMBL:ADN51260.1}; species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Vulcanisaeta.;" source="Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 /; IC-017).;"
PLM3_127_b2_sep16_scaffold_4162_15
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

10342..11025
DNA (684bp) protein (228aa)
ubiquinone/menaquinone biosynthesis methyltransferase; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201] bin=bin1_lowGC species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
ubiquinone/menaquinone biosynthesis methyltransferase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_4162_16
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(11052..12368)
DNA (1317bp) protein (439aa)
NADH dehydrogenase, FAD-containing subunit Tax=Microcoleus sp. PCC 7113 RepID=K9WNV4_9CYAN
NADH dehydrogenase, FAD-containing subunit
NADH dehydrogenase, FAD-containing subunit {ECO:0000313|EMBL:AFZ21217.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
PLM3_127_b2_sep16_scaffold_4162_17
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(12438..13091)
DNA (654bp) protein (218aa)
Pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5)
Pyridoxine/pyridoxamine 5'-phosphate oxidase Tax=Gloeocapsa sp. PCC 7428 RepID=K9XA70_9CHRO
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_4162_18
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(13258..13719)
DNA (462bp) protein (154aa)
Uncharacterized protein Tax=Waddlia chondrophila RepID=D6YVE8_WADCW
Epimerase family protein {ECO:0000313|EMBL:KHE90716.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candidatus Scalindua brodae.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_4162_19
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(13686..13937)
DNA (252bp) protein (84aa)
Uncharacterized protein Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4M0_SALRD
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_4162_20
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(14254..14697)
DNA (444bp) protein (148aa)
hypothetical protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin1_lowGC organism_group=Unknown_CP
P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_4162_21
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

14958..15809
DNA (852bp) protein (284aa)
id=14426087 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_4162_22
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(15974..16987)
DNA (1014bp) protein (338aa)
luciferase family protein bin=bin1_lowGC species=Sphingomonas sp. KC8 genus=Sphingomonas taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
luciferase family protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_4162_23
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists


comp(17096..17794)
DNA (699bp) protein (233aa)
50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 bin=bin1_lowGC species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
50S ribosomal protein L17
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_4162_24
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(17825..18859)
DNA (1035bp) protein (345aa)
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] bin=bin1_lowGC species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
DNA-directed RNA polymerase subunit alpha
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_4162_25
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists


comp(18930..19514)
DNA (585bp) protein (195aa)
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 bin=bin1_lowGC species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
30S ribosomal protein S4
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_4162_26
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists


comp(19612..19995)
DNA (384bp) protein (128aa)
SSU ribosomal protein S11P bin=bin1_lowGC species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=bin1_lowGC organism_group=Unknown_CP
30S ribosomal protein S11
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_4162_27
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists


comp(20015..20395)
DNA (381bp) protein (127aa)
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 bin=bin1_lowGC species=Thermodesulfatator atlanticus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin1_lowGC organism_group=Unknown_CP
30S ribosomal protein S13
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_4162_28
Arcobacter sp. L, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20407..20520)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 Tax=Arcobacter sp. L RepID=G2HWZ7_9PROT
50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter sp. L.;"
PLM3_127_b2_sep16_scaffold_4162_29
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(20537..20758)
DNA (222bp) protein (74aa)
infA; translation initiation factor IF-1 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
infA; translation initiation factor IF-1
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_4162_30
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(20768..21535)
DNA (768bp) protein (256aa)
methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18] bin=bin1_lowGC species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
methionine aminopeptidase
Tax=CSP1_2_Dadabacteria
Displaying items 1-30 of 53 in total

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