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PLM3_127_b2_sep16_scaffold_4715

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_4715_1
unknown

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comp(531..968)
DNA (438bp) protein (146aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4715_trna_1
unknown

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comp(1109..1181)
DNA (73bp)
transferRNA Arg
PLM3_127_b2_sep16_scaffold_4715_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(1172..1966)
DNA (795bp) protein (265aa)
phage SPO1 DNA polymerase-related protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] bin=bin1_lowGC species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
uracil-DNA glycosylase, family 4 (EC:3.2.2.-)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_4715_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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2145..3065
DNA (921bp) protein (307aa)
riboflavin biosynthesis protein RibF (EC:2.7.1.26 2.7.7.2); K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] bin=bin1_lowGC species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
ribF; riboflavin biosynthesis bifunctional riboflavin kinase/FAD synthetase RibF (EC:2.7.1.26 2.7.7.2)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_4715_4
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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3210..4058
DNA (849bp) protein (283aa)
shikimate 5-dehydrogenase-like oxidoreductase; K00014 shikimate dehydrogenase [EC:1.1.1.25] bin=bin1_lowGC species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
shikimate 5-dehydrogenase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_4715_5
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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4173..4418
DNA (246bp) protein (82aa)
id=14425591 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_4715_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(4603..5580)
DNA (978bp) protein (326aa)
glyoxylate reductase; K00015 glyoxylate reductase [EC:1.1.1.26] bin=bin1_lowGC species=Thermosipho africanus genus=Thermosipho taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=bin1_lowGC organism_group=Unknown_CP
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein (EC:1.1.1.26)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_4715_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(5674..6981)
DNA (1308bp) protein (436aa)
hypothetical protein bin=bin1_lowGC species=Amycolicicoccus subflavus genus=Amycolicicoccus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_4715_8
RBG_13_RIF03_48_7_curated, RIF3, Bacteria

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comp(7332..7727)
DNA (396bp) protein (132aa)
PilT-like protein Tax=Beggiatoa sp. PS RepID=A7C4P8_9GAMM
PilT protein domain-containing protein
Tax=RBG_13_RIF03_48_7_curated
PLM3_127_b2_sep16_scaffold_4715_9
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7727..7930)
DNA (204bp) protein (68aa)
Uncharacterized protein Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C0B3_NITHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE14439.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
PLM3_127_b2_sep16_scaffold_4715_10
unknown

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comp(8078..8296)
DNA (219bp) protein (73aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_4715_11
unknown

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comp(8532..8708)
DNA (177bp) protein (59aa)

This feature has no annotations

Displaying 12 items

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