ggKbase home page

PLM3_127_b2_sep16_scaffold_7124

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_7124_1
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

3..89
DNA (87bp) protein (29aa)
GAF domain-containing protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_7124_2
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

219..503
DNA (285bp) protein (95aa)
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_7124_3
unknown

Not on your lists

comp(1684..2058)
DNA (375bp) protein (125aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_7124_4
candidate division Zixibacteria, Bacteria

Not on your lists

2289..2402
DNA (114bp) protein (38aa)
Aldehyde Dehydrogenase Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MJ64_9BACT
Aldehyde Dehydrogenase {ECO:0000313|EMBL:EQB63226.1}; species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
aldehyde dehydrogenase
PLM3_127_b2_sep16_scaffold_7124_5
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

2651..3367
DNA (717bp) protein (239aa)
hypothetical protein; K09807 hypothetical protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_7124_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(3376..3669)
DNA (294bp) protein (98aa)
hypothetical protein bin=bin1_lowGC species=Terriglobus saanensis genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_7124_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

3853..4611
DNA (759bp) protein (253aa)
sir2 family protein; K12410 NAD-dependent deacetylase [EC:3.5.1.-] bin=bin1_lowGC species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
sir2 family protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_7124_8
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

4711..6207
DNA (1497bp) protein (499aa)
thymidylate synthase complementing protein ThyX bin=bin1_lowGC species=Laceyella sacchari genus=Laceyella taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
thyX; thymidylate synthase complementing protein ThyX
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_7124_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(6453..6956)
DNA (504bp) protein (168aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_7124_10
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(6895..7383)
DNA (489bp) protein (163aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
AMP-dependent synthetase and ligase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_7124_11
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

7462..8817
DNA (1356bp) protein (452aa)
metal dependent phosphohydrolase; K00974 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
metal dependent phosphohydrolase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_7124_12
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(8861..9184)
DNA (324bp) protein (108aa)
id=14424647 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_7124_13
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(9156..9407)
DNA (252bp) protein (84aa)
id=14424647 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_7124_14
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(9531..9860)
DNA (330bp) protein (110aa)
ATP synthase subunit C; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
atpC2; H(+)-transporting two-sector ATPase (EC:3.6.3.14)
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_7124_15
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(9927..10625)
DNA (699bp) protein (233aa)
atpB; ATP synthase F0 subunit A bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
ATP synthase subunit A
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_7124_16
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(10612..10998)
DNA (387bp) protein (129aa)
id=14424644 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_7124_17
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(11216..12511)
DNA (1296bp) protein (432aa)
glutamate-1-semialdehyde-2,1-aminomutase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] bin=bin1_lowGC species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_7124_18
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(12682..13281)
DNA (600bp) protein (200aa)
peptidoglycan-associated lipoprotein; K03640 peptidoglycan-associated lipoprotein bin=bin1_lowGC species=Chlorobium ferrooxidans genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=bin1_lowGC organism_group=Unknown_CP
peptidoglycan-associated lipoprotein
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_7124_19
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(13433..14104)
DNA (672bp) protein (224aa)
putative aspartyl/asparaginyl beta-hydroxylase (Aspartate beta-hydroxylase) (Peptide-aspartate beta-dioxygenase) (EC:1.14.11.16) bin=bin1_lowGC species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_7124_20
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(14154..14882)
DNA (729bp) protein (243aa)
peptidoglycan-associated lipoprotein; K03640 peptidoglycan-associated lipoprotein bin=bin1_lowGC species=Pelodictyon phaeoclathratiforme genus=Pelodictyon taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=bin1_lowGC organism_group=Unknown_CP
peptidoglycan-associated lipoprotein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_7124_21
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

15162..15731
DNA (570bp) protein (190aa)
hypothetical protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_7124_22
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

16001..16969
DNA (969bp) protein (323aa)
PhoH family protein; K06217 phosphate starvation-inducible protein PhoH and related proteins bin=bin1_lowGC species=Thermodesulfatator atlanticus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin1_lowGC organism_group=Unknown_CP
phoH protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_7124_23
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

16996..17238
DNA (243bp) protein (81aa)
id=14425748 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
Displaying 23 items

View Taxonomy