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PLM3_127_b2_sep16_scaffold_1016

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_1016_1
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

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2..529
DNA (528bp) protein (176aa)
Putative transposase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I4H7_CALAS
putative transposase
Tax=RBG_16_Chloroflexi_57_9_curated
PLM3_127_b2_sep16_scaffold_1016_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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787..960
DNA (174bp) protein (58aa)
meaA; methylmalonyl-CoA mutase bin=bin1_lowGC species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
methylmalonyl-CoA mutase large subunit
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1016_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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942..2744
DNA (1803bp) protein (601aa)
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2)
meaA; methylmalonyl-CoA mutase bin=bin1_lowGC species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1016_4
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(2812..3444)
DNA (633bp) protein (211aa)
id=14425710 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1016_5
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

3650..4111
DNA (462bp) protein (154aa)
hypothetical protein bin=bin1_lowGC species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1016_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

4254..4736
DNA (483bp) protein (161aa)
peptidase M23B bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
metalloendopeptidase-like membrane protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1016_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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4749..5270
DNA (522bp) protein (174aa)
adenine phosphoribosyltransferase; K00759 adenine phosphoribosyltransferase [EC:2.4.2.7] bin=bin1_lowGC species=Thermovibrio ammonificans genus=Thermovibrio taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=bin1_lowGC organism_group=Unknown_CP
apt; adenine phosphoribosyltransferase (EC:2.4.2.7)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1016_8
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

5267..6226
DNA (960bp) protein (320aa)
sphingosine kinase enzyme bin=bin1_lowGC species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1016_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

6267..7370
DNA (1104bp) protein (368aa)
3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4] bin=bin1_lowGC species=Clostridium sp. CAG:264 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
3-dehydroquinate synthase (EC:4.2.3.4)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1016_10
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

7520..8167
DNA (648bp) protein (216aa)
tRNA (guanine46-N7-)-methyltransferase (EC:2.1.1.33) bin=bin1_lowGC species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin1_lowGC organism_group=Unknown_CP
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1016_11
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

8288..8551
DNA (264bp) protein (88aa)
id=14425193 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1016_12
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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comp(8609..9172)
DNA (564bp) protein (188aa)
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_1016_13
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

9349..10368
DNA (1020bp) protein (340aa)
3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54); K03856 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] bin=bin1_lowGC species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
aroG-2; 3-deoxy-7-phosphoheptulonate synthase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1016_14
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(10404..11009)
DNA (606bp) protein (202aa)
purN; phosphoribosylglycinamide formyltransferase; K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] bin=bin1_lowGC species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
phosphoribosylglycinamide formyltransferase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1016_15
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(11249..12841)
DNA (1593bp) protein (531aa)
RNA polymerase sigma70 factor bin=bin1_lowGC species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
RpoD family RNA polymerase sigma factor
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1016_16
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(12831..14603)
DNA (1773bp) protein (591aa)
DNA primase; K02316 DNA primase [EC:2.7.7.-] bin=bin1_lowGC species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
DNA primase (EC:2.7.7.-)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1016_17
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(14747..14938)
DNA (192bp) protein (64aa)
30S ribosomal protein S21; K02970 small subunit ribosomal protein S21 bin=bin1_lowGC species=Hippea alviniae genus=Hippea taxon_order=Desulfurellales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
rpsU; 30S ribosomal protein S21
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_1016_18
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(15057..15227)
DNA (171bp) protein (57aa)
id=14425183 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1016_19
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(15466..16179)
DNA (714bp) protein (238aa)
hypothetical protein; K09798 hypothetical protein bin=bin1_lowGC species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_1016_20
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(16193..17338)
DNA (1146bp) protein (382aa)
carboxy-terminal processing protease (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102] bin=bin1_lowGC species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin1_lowGC organism_group=Unknown_CP
carboxyl-terminal protease (EC:3.4.21.102)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1016_21
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(17411..17728)
DNA (318bp) protein (106aa)
transketolase bin=bin1_lowGC species=Desulfitobacterium dichloroeliminans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
transketolase, central region
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1016_22
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

18211..18963
DNA (753bp) protein (251aa)
uppS; UDP-pyrophosphate synthetase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] bin=bin1_lowGC species=unknown genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=bin1_lowGC organism_group=Unknown_CP
undecaprenyl diphosphate synthase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1016_23
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

18960..20129
DNA (1170bp) protein (390aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] bin=bin1_lowGC species=Chlorobium phaeobacteroides genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=bin1_lowGC organism_group=Unknown_CP
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1016_24
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

20126..21721
DNA (1596bp) protein (532aa)
peptidase M50 membrane-associated zinc metallopeptidase; K11749 regulator of sigma E protease [EC:3.4.24.-] bin=bin1_lowGC species=Thioalkalivibrio sp. ALSr1 genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
peptidase M50
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1016_25
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

21958..22317
DNA (360bp) protein (120aa)
hypothetical protein bin=bin1_lowGC species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
Displaying 25 items

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