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PLM3_127_b2_sep16_scaffold_1205

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_1205_1
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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2..595
DNA (594bp) protein (198aa)
hypothetical protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1205_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

601..1152
DNA (552bp) protein (184aa)
ruvC; Holliday junction resolvase (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] bin=bin1_lowGC species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
ruvC; Holliday junction resolvase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1205_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

1130..1717
DNA (588bp) protein (196aa)
ruvA; Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] bin=bin1_lowGC species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
holliday junction DNA helicase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1205_4
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

1770..2786
DNA (1017bp) protein (339aa)
Holliday junction DNA helicase subunit RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] bin=bin1_lowGC species=Nitrospina sp. AB-629-B06 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin1_lowGC organism_group=Unknown_CP
Holliday junction DNA helicase RuvB
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1205_5
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(2804..3250)
DNA (447bp) protein (149aa)
id=14425469 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1205_6
Candidatus Magnetobacterium bavaricum, Candidatus Magnetobacterium, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(3499..5469)
DNA (1971bp) protein (657aa)
Putative membrane protein (DUF2339) bin=GWC2_CP_Nitrospirae-rel_42_7 species=Desulfitobacterium dehalogenans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Uncharacterized protein {ECO:0000313|EMBL:KJU86580.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetobacterium.;" source="Candidatus Magnetobacterium bavaricum.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1205_7
Desulfuromonas acetoxidans, Desulfuromonas, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5518..6114)
DNA (597bp) protein (199aa)
Transcriptional regulator, TetR family Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXM0_DESAC
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EAT14942.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Desulfuromonadaceae; Desulfuromonas.;" source="Desulfuromonas acetoxidans DSM 684.;"
TetR family transcriptional regulator
PLM3_127_b2_sep16_scaffold_1205_8
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

6528..7295
DNA (768bp) protein (256aa)
protein TolQ; K03562 biopolymer transport protein TolQ bin=bin1_lowGC species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
protein TolQ
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_1205_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

7307..7756
DNA (450bp) protein (150aa)
biopolymer transport protein ExbD/TolR; K03560 biopolymer transport protein TolR bin=bin1_lowGC species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
protein TolR
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1205_10
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

7845..8783
DNA (939bp) protein (313aa)
neurofilament protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
TonB family protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1205_11
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

8890..9432
DNA (543bp) protein (181aa)
gpmB; phosphoglycerate mutase GpmB (EC:5.4.2.1) bin=bin1_lowGC species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
phosphoglycerate mutase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1205_12
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists


9500..11179
DNA (1680bp) protein (560aa)
argS; arginyl-tRNA synthetase; K01887 arginyl-tRNA synthetase [EC:6.1.1.19] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1205_13
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

11195..11836
DNA (642bp) protein (214aa)
adventurous gliding motility protein AgmI bin=bin1_lowGC species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
Sporulation domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_1205_14
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

11886..12578
DNA (693bp) protein (231aa)
CDP-alcohol phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
CDP-alcohol phosphatidyltransferase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1205_15
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists


comp(12641..13027)
DNA (387bp) protein (129aa)
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin1_lowGC organism_group=Unknown_CP
50S ribosomal protein L19
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1205_16
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(13043..14341)
DNA (1299bp) protein (433aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] bin=bin1_lowGC species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=bin1_lowGC organism_group=Unknown_CP
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1205_17
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(14386..14892)
DNA (507bp) protein (169aa)
rimM; 16S rRNA processing protein RimM bin=bin1_lowGC species=Clostridium sp. CAG:780 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
rimM; 16S rRNA processing protein RimM
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1205_18
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(14912..15151)
DNA (240bp) protein (80aa)
hypothetical protein; K06960 bin=bin1_lowGC species=Desulfovibrio vulgaris genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1205_19
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists


comp(15210..15443)
DNA (234bp) protein (78aa)
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 bin=bin1_lowGC species=Thermodesulfobacterium thermophilum genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin1_lowGC organism_group=Unknown_CP
SSU ribosomal protein S16P
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_1205_20
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists


comp(15494..16828)
DNA (1335bp) protein (445aa)
signal recognition particle subunit FFH/SRP54 (srp54); K03106 signal recognition particle subunit SRP54 bin=bin1_lowGC species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
signal recognition particle protein
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_1205_21
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(16999..17211)
DNA (213bp) protein (71aa)
id=14425486 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1205_22
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(17468..17926)
DNA (459bp) protein (153aa)
Heat shock protein Hsp20 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
molecular chaperone
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1205_23
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

18192..18872
DNA (681bp) protein (227aa)
Uncharacterized protein Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q527_9BACT
Uncharacterized protein {ECO:0000313|EMBL:GAN31586.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
hypothetical protein
Displaying 23 items

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