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PLM3_127_b2_sep16_scaffold_1896

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_1896_1
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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3..1757
DNA (1755bp) protein (585aa)
penicillin-binding protein (EC:2.4.1.129); K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-] bin=bin1_lowGC species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
penicillin-binding protein 1A
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1896_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(1754..2278)
DNA (525bp) protein (175aa)
Helix-hairpin-helix motif protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
comEA; putative competence protein ComEA
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1896_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(2294..3085)
DNA (792bp) protein (264aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin1_lowGC organism_group=Unknown_CP
short-chain dehydrogenase/reductase SDR
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1896_4
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(3283..3606)
DNA (324bp) protein (108aa)
FmdB family regulatory protein bin=bin1_lowGC species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
FmdB family regulatory protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1896_5
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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3991..4425
DNA (435bp) protein (145aa)
Putative uncharacterized protein Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q4W531_METCA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAY43645.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
PLM3_127_b2_sep16_scaffold_1896_6
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4426..5397)
DNA (972bp) protein (324aa)
ATPase BadF/BadG/BcrA/BcrD type Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9RAJ0_CLOSW
BadF/BadG/BcrA/BcrD type ATPase
ATPase BadF/BadG/BcrA/BcrD type {ECO:0000313|EMBL:ADL04268.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
PLM3_127_b2_sep16_scaffold_1896_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

6006..6725
DNA (720bp) protein (240aa)
short-chain dehydrogenase/reductase SDR bin=bin1_lowGC species=Microbulbifer agarilyticus genus=Microbulbifer taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
short-chain dehydrogenase/reductase SDR
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1896_8
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6900..7598)
DNA (699bp) protein (233aa)
hypothetical protein Tax=Paenisporosarcina sp. TG-14 RepID=UPI0002F30882
Lactate utilization protein B/C {ECO:0000313|EMBL:ETX00206.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1896_9
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

comp(7711..9141)
DNA (1431bp) protein (477aa)
hypothetical protein Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034DBD0F
iron-sulfur cluster binding protein
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
PLM3_127_b2_sep16_scaffold_1896_10

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comp(9173..9829)
DNA (657bp) protein (219aa)
Fe-S oxidoreductase Tax=Desulfospira joergensenii RepID=UPI0003B786F0
Uncharacterized protein {ECO:0000313|EMBL:KKK49103.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1896_11
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

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10137..11213
DNA (1077bp) protein (359aa)
Uncharacterized protein Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GDS7_9CYAN
hypothetical protein
Tax=RBG_13_Nitrospirae_41_22_curated
PLM3_127_b2_sep16_scaffold_1896_12
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(11226..14027)
DNA (2802bp) protein (934aa)
ileS; isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] bin=bin1_lowGC species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1896_13
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(14171..14506)
DNA (336bp) protein (112aa)
id=14426129 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_1896_14
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(14851..15066)
DNA (216bp) protein (72aa)
Putative uncharacterized protein Tax=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) RepID=B4SF25_PELPB
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
PLM3_127_b2_sep16_scaffold_1896_15
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(15066..15308)
DNA (243bp) protein (81aa)
Uncharacterized protein Tax=Sorangium cellulosum (strain So ce56) RepID=A9FXY2_SORC5
hypothetical protein
Tax=RBG_13_Planctomycetes_63_9_curated
PLM3_127_b2_sep16_scaffold_1896_16
RBG_16_OP11_Woesebacteria_34_12_curated, Woesebacteria, Microgenomates, Bacteria

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15819..16106
DNA (288bp) protein (96aa)
Cyclase/dehydrase bin=GWF2_Ignavibacteria_35_20 species=Methanobacterium sp. genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
cyclase
Tax=RBG_16_OP11_Woesebacteria_34_12_curated
PLM3_127_b2_sep16_scaffold_1896_17
unknown

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comp(16365..16664)
DNA (300bp) protein (100aa)

This feature has no annotations

Displaying 17 items

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