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PLM3_127_b2_sep16_scaffold_1001

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Displaying items 1-30 of 47 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_1001_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..711
DNA (711bp) protein (237aa)
Threonine dehydratase, medium form Tax=Polaromonas sp. CF318 RepID=J2KF93_9BURK
tdcB; threonine dehydratase catabolic
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_1001_2
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(974..1570)
DNA (597bp) protein (199aa)
Uncharacterized protein Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3R6Q8_CUPTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAQ70541.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis; (strain LMG 19424)).;"
PLM3_127_b2_sep16_scaffold_1001_3
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

1662..2921
DNA (1260bp) protein (420aa)
Dicarboxylate carrier MatC domain protein Tax=Thermosinus carboxydivorans Nor1 RepID=A1HP25_9FIRM
Dicarboxylate carrier MatC domain protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3_127_b2_sep16_scaffold_1001_4
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3204..3503)
DNA (300bp) protein (100aa)
Addiction module antidote protein Tax=Acidovorax sp. NO-1 RepID=H0C0K2_9BURK
addiction module antidote protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM3_127_b2_sep16_scaffold_1001_5
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3500..3706)
DNA (207bp) protein (69aa)
Putative uncharacterized protein Tax=Acidovorax sp. NO-1 RepID=H0C0K3_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL21834.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1001_6
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3927..5030)
DNA (1104bp) protein (368aa)
Uncharacterized protein Tax=Bradyrhizobium sp. ORS 285 RepID=H0RUM1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD85648.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
signal peptide
PLM3_127_b2_sep16_scaffold_1001_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6452..6658)
DNA (207bp) protein (69aa)
altronate dehydratase (EC:4.2.1.7)
Putative D-galactarate dehydratase/Altronate hydrolase {ECO:0000313|EMBL:KFC65214.1}; EC=4.2.1.42 {ECO:0000313|EMBL:KFC65214.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Altronate dehydratase Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JQ74_BURP8
PLM3_127_b2_sep16_scaffold_1001_8
Pseudovibrio sp. FO-BEG1, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6662..7879)
DNA (1218bp) protein (406aa)
Mandelate racemase / muconate lactonizing enzyme family protein Tax=Pseudovibrio sp. (strain FO-BEG1) RepID=G8PV21_PSEUV
mandelate racemase/muconate lactonizing enzyme family protein
Mandelate racemase / muconate lactonizing enzyme family protein {ECO:0000313|EMBL:AEV39609.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;" source="Pseudovibrio sp. (strain FO-BEG1).;"
PLM3_127_b2_sep16_scaffold_1001_9
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7994..8869
DNA (876bp) protein (292aa)
hypothetical protein Tax=alpha proteobacterium SCGC AAA536-G10 RepID=UPI00035FCB21
Citrate lyase
Citrate lyase {ECO:0000313|EMBL:CCD02099.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
PLM3_127_b2_sep16_scaffold_1001_10
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8987..10042
DNA (1056bp) protein (352aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
selD; selenophosphate synthase (EC:2.7.9.3)
Selenide, water dikinase Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LGJ8_RALME
PLM3_127_b2_sep16_scaffold_1001_11
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10237..11142
DNA (906bp) protein (302aa)
Cation diffusion facilitator family transporter Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QN19_AZOSU
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:AEV25804.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
PLM3_127_b2_sep16_scaffold_1001_12
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11358..12554)
DNA (1197bp) protein (399aa)
Major facilitator superfamily protein Tax=Pontibacter sp. BAB1700 RepID=J0V292_9BACT
Major facilitator superfamily protein {ECO:0000313|EMBL:EJF08107.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
major facilitator superfamily MFS_1
PLM3_127_b2_sep16_scaffold_1001_13
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12563..13753)
DNA (1191bp) protein (397aa)
MFS permease Tax=Oceanibaculum indicum P24 RepID=K2J3Z2_9PROT
major facilitator superfamily protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_1001_14
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13872..14051)
DNA (180bp) protein (60aa)
Uncharacterized protein Tax=Thauera RepID=N6YQA7_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO82764.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1001_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14296..16134
DNA (1839bp) protein (613aa)
oligopeptidase B (EC:3.4.21.83)
Uncharacterized protein Tax=uncultured Latescibacteria bacterium RepID=Q2YZV3_9BACT
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_1001_16
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16237..17490
DNA (1254bp) protein (418aa)
Formamidase (EC:3.5.1.49)
Acetamidase/Formamidase family Tax=Synechococcus sp. PCC 7335 RepID=B4WPW3_9SYNE
Formamidase {ECO:0000313|EMBL:ETW98194.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM3_127_b2_sep16_scaffold_1001_17
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17608..18183
DNA (576bp) protein (192aa)
Putative uncharacterized protein Tax=Synechococcus sp. PCC 7335 RepID=B4WPW2_9SYNE
Uncharacterized protein {ECO:0000313|EMBL:ETW98195.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM3_127_b2_sep16_scaffold_1001_18
unknown

Not on your lists

18241..18963
DNA (723bp) protein (241aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1001_19
unknown

Not on your lists

comp(18971..19381)
DNA (411bp) protein (137aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1001_20
unknown

Not on your lists

comp(19378..19749)
DNA (372bp) protein (124aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1001_21
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19954..20976
DNA (1023bp) protein (341aa)
L-allo-threonine aldolase, stereospecific Tax=Geobacter metallireducens RepID=Q39Z09_GEOMG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE02305.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
PLM3_127_b2_sep16_scaffold_1001_22
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

21116..21979
DNA (864bp) protein (288aa)
Uncharacterized protein Tax=Sulfuricella denitrificans skB26 RepID=S6ADW5_9PROT
hypothetical protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
PLM3_127_b2_sep16_scaffold_1001_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22109..23305
DNA (1197bp) protein (399aa)
Putative uncharacterized protein Tax=Nitrosococcus oceani RepID=Q3JCE5_NITOC
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_1001_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23302..25308
DNA (2007bp) protein (669aa)
Uncharacterized protein Tax=Cellvibrio sp. BR RepID=I3IAF8_9GAMM
Monogalactosyldiacylglycerol synthase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_1001_25
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25271..25915
DNA (645bp) protein (215aa)
Polysaccharide deacetylase Tax=Cellvibrio sp. BR RepID=I3IAG0_9GAMM
polysaccharide deacetylase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_1001_26
Endozoicomonas elysicola, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26013..26477
DNA (465bp) protein (155aa)
hypothetical protein Tax=zeta proteobacterium SCGC AB-137-C09 RepID=UPI00036D3ACC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEI71229.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozoicomonas.;" source="Endozoicomonas elysicola.;"
PLM3_127_b2_sep16_scaffold_1001_27
Grimontia sp. AD028, Grimontia, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26748..27209
DNA (462bp) protein (154aa)
Endoribonuclease L-PSP Tax=Grimontia sp. AK16 RepID=R1IJF2_9GAMM
Endoribonuclease L-PSP {ECO:0000313|EMBL:KKD60640.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Grimontia.;" source="Grimontia sp. AD028.;"
endoribonuclease L-PSP
PLM3_127_b2_sep16_scaffold_1001_28
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27439..27801
DNA (363bp) protein (121aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_1001_29
unknown

Not on your lists

comp(28102..28356)
DNA (255bp) protein (85aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1001_30
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

28847..29587
DNA (741bp) protein (247aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
Displaying items 1-30 of 47 in total

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